RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 SCUBE3Q8IX30 993 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 CACNA2D3Q8IZS8 1091 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 CCDC89Q8N998 374 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 C3orf20Q8ND61 904 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 CLEC4CQ8WTT0 213 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 PGM2Q96G03 612 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 ZMAT2Q96NC0 199 aaKnown RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 MRPL45Q9BRJ2 306 aaKnown RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 ADPGKQ9BRR6 497 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 COX16Q9P0S2 106 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 TNFSF13BQ9Y275 285 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 DNM1LO00429 736 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 BASP1P80723 227 aaKnown RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 SARNPP82979 210 aaKnown RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 MSS51Q4VC12 460 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 TFDP3Q5H9I0 405 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 ZNF618Q5T7W0 954 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 CCDC121Q6ZUS5 278 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 FASTKD5Q7L8L6 764 aaKnown RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 RCOR2Q8IZ40 523 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 TMEM176AQ96HP8 235 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 DPEP3Q9H4B8 488 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 TSPAN16Q9UKR8 245 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 HEY1Q9Y5J3 304 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 DOCK3Q8IZD9 2030 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 A0A087WUV0 522 aaPredicted RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 ASAP2O43150 1006 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 B4GALT4O60513 344 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 CETN2P41208 172 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 ZC3H12AQ5D1E8 599 aaKnown RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 GKAP1Q5VSY0 366 aaPredicted RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 NUGGCQ68CJ6 796 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 RBM41Q96IZ5 413 aaKnown RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 C16orf70Q9BSU1 422 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 DPP3Q9NY33 737 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 CPA4Q9UI42 421 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 GJD2Q9UKL4 321 aa12.94□□□□□ -0.34
PDE6B-212ENST00000496514 MRPL42Q9Y6G3 142 aaKnown RBP12.94□□□□□ -0.34
PDE6B-212ENST00000496514 SCN1AP35498 2009 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 EXOC1LA0A1B0GW35 172 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 CCDC189A1A4V9 331 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 WDR91A4D1P6 747 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 TSPAN1O60635 241 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 AVILO75366 819 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 AGTP01019 485 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 ADORA2BP29275 332 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 SLC25A11Q02978 314 aaKnown RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 GRIK4Q16099 956 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 PPP6R3Q5H9R7 873 aaPredicted RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 PPP1R15BQ5SWA1 713 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 MTHFD1LQ6UB35 978 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 VCPIP1Q96JH7 1222 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 TRIM56Q9BRZ2 755 aaKnown RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 NXF3Q9H4D5 531 aaKnown RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 ALG13Q9NP73 1137 aaKnown RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 PRMT7Q9NVM4 692 aaPredicted RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 HTTP42858 3142 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 RASA4BC9J798 803 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 RASA4O43374 803 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 EIF4BP23588 611 aaKnown RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 ABCD1P33897 745 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 CDH6P55285 790 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 YWHAEP62258 255 aaKnown RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 BBS9Q3SYG4 887 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 PPP1R26Q5T8A7 1209 aaPredicted RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 FAM183BPQ6ZVS7 135 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 TRMT10CQ7L0Y3 403 aaKnown RBP12.93□□□□□ -0.34
PDE6B-212ENST00000496514 OR6J1Q8NGC5 347 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 BRI3BPQ8WY22 251 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 RUNDC3BQ96NL0 473 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 MROH8Q9H579 483 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 NME7Q9Y5B8 376 aa12.93□□□□□ -0.34
PDE6B-212ENST00000496514 A0A1W2PPM1 405 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 CILPO75339 1184 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 KRT15P19012 456 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 BEX3Q00994 111 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 GOLGA7BQ2TAP0 167 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 FNBP1LQ5T0N5 605 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 EMC10Q5UCC4 262 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 HIBCHQ6NVY1 386 aaPredicted RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 NPLOC4Q8TAT6 608 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 RXFP2Q8WXD0 754 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 ACAP3Q96P50 834 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 CTCFP49711 727 aaPredicted RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 YARSP54577 528 aaKnown RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 VCPP55072 806 aaKnown RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 PIGHQ14442 188 aaPredicted RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 CA9Q16790 459 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 MARCH8Q5T0T0 291 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 PMF1Q6P1K2 205 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 CATSPER4Q7RTX7 472 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 OR6B3Q8NGW1 331 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 PPM1EQ8WY54 764 aa12.92□□□□□ -0.34
PDE6B-212ENST00000496514 ZNF317Q96PQ6 595 aaPredicted RBP12.92□□□□□ -0.34
PDE6B-212ENST00000496514 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms