RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 CDC42EP1Q00587 391 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 LLGL1Q15334 1064 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 RSPH3Q86UC2 560 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 HPDLQ96IR7 371 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 FMO2Q99518 471 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 GCOM2Q9BZD3 368 aaPredicted RBP16.47■□□□□ 0.23
SHISA5-216ENST00000494854 LHX5Q9H2C1 402 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 SLC28A3Q9HAS3 691 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 CYP3A43Q9HB55 503 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 LCMT1Q9UIC8 334 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 ITGA11Q9UKX5 1188 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 GINS2Q9Y248 185 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 YBX2Q9Y2T7 364 aaKnown RBP16.47■□□□□ 0.23
SHISA5-216ENST00000494854 SNX24Q9Y343 169 aa16.47■□□□□ 0.23
SHISA5-216ENST00000494854 PDCD11Q14690 1871 aaKnown RBP16.46■□□□□ 0.23
SHISA5-216ENST00000494854 SMIM35A0A1B0GVV1 85 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 GPR32O75388 356 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 KRT14P02533 472 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 TAP1Q03518 808 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 MTMR3Q13615 1198 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 GRIN2CQ14957 1233 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 UAP1Q16222 522 aaPredicted RBP16.46■□□□□ 0.23
SHISA5-216ENST00000494854 TCTN1Q2MV58 587 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 SGO2Q562F6 1265 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 DENND1BQ6P3S1 775 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 RUFY4Q6ZNE9 571 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 TMC3Q7Z5M5 1100 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 KATNAL2Q8IYT4 538 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 SLC4A11Q8NBS3 891 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 ARL8AQ96BM9 186 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 MCEEQ96PE7 176 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 ZDHHC18Q9NUE0 388 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 DPP3Q9NY33 737 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 PLAAQ9Y263 795 aa16.46■□□□□ 0.23
SHISA5-216ENST00000494854 PTPRSQ13332 1948 aa16.46■□□□□ 0.22
SHISA5-216ENST00000494854 CILPO75339 1184 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 NPTXRO95502 500 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 SSR1P43307 286 aaKnown RBP16.45■□□□□ 0.22
SHISA5-216ENST00000494854 KCNJ1P48048 391 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 RABGGTBP53611 331 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 RBP5P82980 135 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 TTMPQ5BVD1 217 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 DCUN1D2Q6PH85 259 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 CATSPER4Q7RTX7 472 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 APBB1IPQ7Z5R6 666 aaPredicted RBP16.45■□□□□ 0.22
SHISA5-216ENST00000494854 CCDC50Q8IVM0 306 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 C3orf20Q8ND61 904 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 DBF4BQ8NFT6 615 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 FAM76AQ8TAV0 307 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 TWNKQ96RR1 684 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 NKX2-4Q9H2Z4 354 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 STRIP2Q9ULQ0 834 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 SCN1AP35498 2009 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 MICAL3Q7RTP6 2002 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 STAU1O95793 577 aaKnown RBP16.45■□□□□ 0.22
SHISA5-216ENST00000494854 CHRNA1P02708 482 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 HOXA11P31270 313 aaPredicted RBP16.45■□□□□ 0.22
SHISA5-216ENST00000494854 GBP1P32455 592 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 DHX9Q08211 1270 aaKnown RBP16.45■□□□□ 0.22
SHISA5-216ENST00000494854 ZNF252P-AS1Q0IIN9 211 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 ORC1Q13415 861 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 CYP4A22Q5TCH4 519 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 SLC27A1Q6PCB7 646 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 LRIG3Q6UXM1 1119 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 EXD1Q8NHP7 514 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 C1orf54Q8WWF1 131 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 SEPT8Q92599 483 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 KIF12Q96FN5 646 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 TMEM176AQ96HP8 235 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 OSMRQ99650 979 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 HERPUD2Q9BSE4 406 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 CDHR5Q9HBB8 845 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 HMGXB4Q9UGU5 601 aa16.45■□□□□ 0.22
SHISA5-216ENST00000494854 ECEL1O95672 775 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 CTSHP09668 335 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 GJC1P36383 396 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 RPL21P46778 160 aaKnown RBP16.44■□□□□ 0.22
SHISA5-216ENST00000494854 PLTPP55058 493 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 MGAT3Q09327 533 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 PTPN20Q4JDL3 420 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 ZDHHC24Q6UX98 284 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 UBLCP1Q8WVY7 318 aaPredicted RBP16.44■□□□□ 0.22
SHISA5-216ENST00000494854 DNAJB3Q8WWF6 145 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 MYLIPQ8WY64 445 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 APBB2Q92870 758 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 SLCO2A1Q92959 643 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 GRHL1Q9NZI5 618 aa16.44■□□□□ 0.22
SHISA5-216ENST00000494854 RALAP11233 206 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 OGDHQ02218 1023 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 KLF1Q13351 362 aaPredicted RBP16.43■□□□□ 0.22
SHISA5-216ENST00000494854 PCBP1Q15365 356 aaKnown RBP eCLIP16.43■□□□□ 0.222e-6■■■□□ 18.3
SHISA5-216ENST00000494854 NOTUMQ6P988 496 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 NME8Q8N427 588 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 FBXO25Q8TCJ0 367 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 PLEKHA5Q9HAU0 1116 aa16.43■□□□□ 0.22
SHISA5-216ENST00000494854 CHST7Q9NS84 486 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms