RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 RASSF9O75901 435 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 LMNAP02545 664 aaKnown RBP6.97□□□□□ -1.29
MSL3-217ENST00000494268 IL1R1P14778 569 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 ADORA2AP29274 412 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 PTH2RP49190 550 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 PURAQ00577 322 aaKnown RBP6.97□□□□□ -1.29
MSL3-217ENST00000494268 KCTD20Q7Z5Y7 419 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 SIMC1Q8NDZ2 872 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 BPIFB1Q8TDL5 484 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 ATG4AQ8WYN0 398 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 SLC9A6Q92581 669 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 NAA15Q9BXJ9 866 aaKnown RBP6.97□□□□□ -1.29
MSL3-217ENST00000494268 BTBD1Q9H0C5 482 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 CHST8Q9H2A9 424 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 XPNPEP3Q9NQH7 507 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 ZSCAN32Q9NX65 697 aa6.97□□□□□ -1.29
MSL3-217ENST00000494268 MBD3L4A6NDZ8 208 aaPredicted RBP6.96□□□□□ -1.3
MSL3-217ENST00000494268 MBD3L3A6NE82 208 aaPredicted RBP6.96□□□□□ -1.3
MSL3-217ENST00000494268 RHPN2P1A8MT19 583 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 H7C4K7 107 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 LIPAP38571 399 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 GRIA3P42263 894 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 CLK3P49761 638 aaKnown RBP6.96□□□□□ -1.3
MSL3-217ENST00000494268 SATB1Q01826 763 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 HLTFQ14527 1009 aaKnown RBP eCLIP6.96□□□□□ -1.3
MSL3-217ENST00000494268 LY6KQ17RY6 165 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 NBPF8Q3BBV2 869 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 PRR16Q569H4 304 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 UNC13DQ70J99 1090 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 MSLNLQ96KJ4 702 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 PKNOX2Q96KN3 472 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 TBCBQ99426 244 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 ARNT2Q9HBZ2 717 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 GBA2Q9HCG7 927 aaPredicted RBP6.96□□□□□ -1.3
MSL3-217ENST00000494268 IL17RBQ9NRM6 502 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 ITGB1BP2Q9UKP3 347 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 HDAC9Q9UKV0 1011 aa6.96□□□□□ -1.3
MSL3-217ENST00000494268 LINC00473A8K010 186 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 KPNA5O15131 536 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 KRT18P05783 430 aaKnown RBP6.95□□□□□ -1.3
MSL3-217ENST00000494268 MYL3P08590 195 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 ZFXP17010 805 aaPredicted RBP6.95□□□□□ -1.3
MSL3-217ENST00000494268 KLRC1P26715 233 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 CLCN2P51788 898 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 HTRA4P83105 476 aaPredicted RBP6.95□□□□□ -1.3
MSL3-217ENST00000494268 TREML2Q5T2D2 321 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 DEPDC1Q5TB30 811 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 SLC15A3Q8IY34 581 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 TMEM171Q8WVE6 324 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 GLG1Q92896 1179 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 PBKQ96KB5 322 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 PPP1R9BQ96SB3 815 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 STRBPQ96SI9 672 aaKnown RBP6.95□□□□□ -1.3
MSL3-217ENST00000494268 ALG8Q9BVK2 526 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 EHD3Q9NZN3 535 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 POLR2AP24928 1970 aaKnown RBP6.95□□□□□ -1.3
MSL3-217ENST00000494268 FER1L4A9Z1Z3 1794 aa6.95□□□□□ -1.3
MSL3-217ENST00000494268 RPL17P18621 184 aaKnown RBP6.94□□□□□ -1.3
MSL3-217ENST00000494268 BMP5P22003 454 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 ITGA8P53708 1063 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 PRKAG1P54619 331 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 ZNF543Q08ER8 600 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 NPY5RQ15761 445 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 ZNF362Q5T0B9 420 aaPredicted RBP6.94□□□□□ -1.3
MSL3-217ENST00000494268 CCDC181Q5TID7 509 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 CAGE1Q8TC20 777 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 UNKQ9C0B0 810 aaKnown RBP6.94□□□□□ -1.3
MSL3-217ENST00000494268 PRDM13Q9H4Q3 707 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 AS3MTQ9HBK9 375 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 ZNHIT2Q9UHR6 403 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 MID2Q9UJV3 735 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 PAXBP1Q9Y5B6 917 aa6.94□□□□□ -1.3
MSL3-217ENST00000494268 COL11A2P13942 1736 aaPredicted RBP6.93□□□□□ -1.3
MSL3-217ENST00000494268 LOC102723971A0A1B0GUV8 181 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 A1L4Q6 167 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 RAB27BO00194 218 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 SLC16A3O15427 465 aaKnown RBP6.93□□□□□ -1.3
MSL3-217ENST00000494268 TLR5O60602 858 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 VNN1O95497 513 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 MT-ND5P03915 603 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 FESP07332 822 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 TXNP10599 105 aaKnown RBP6.93□□□□□ -1.3
MSL3-217ENST00000494268 JUPP14923 745 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 PTDSS1P48651 473 aaKnown RBP6.93□□□□□ -1.3
MSL3-217ENST00000494268 PRIM2P49643 509 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 ATXN1P54253 815 aaKnown RBP6.93□□□□□ -1.3
MSL3-217ENST00000494268 BMPR2Q13873 1038 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 MAP9Q49MG5 647 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 KLHDC7AQ5VTJ3 777 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 IL31Q6EBC2 164 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 LIX1LQ8IVB5 337 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 ABRAQ8N0Z2 381 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 PARD3BQ8TEW8 1205 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 ATRIPQ8WXE1 791 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 SNX22Q96L94 193 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 TBC1D23Q9NUY8 699 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 DNMT3BQ9UBC3 853 aaKnown RBP6.93□□□□□ -1.3
MSL3-217ENST00000494268 TLK1Q9UKI8 766 aa6.93□□□□□ -1.3
MSL3-217ENST00000494268 SNX14Q9Y5W7 946 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms