RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 KRT15P19012 456 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 APEX1P27695 318 aaKnown RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 ADAM8P78325 824 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 DEFB103AP81534 67 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 TNFAIP2Q03169 654 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 GABPAQ06546 454 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 FSCN1Q16658 493 aaKnown RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 GAGE13Q4V321 117 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 SLC9C2Q5TAH2 1124 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 NAIF1Q69YI7 327 aaPredicted RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 NSMFQ6X4W1 530 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 Q6YL49 198 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 MAMDC2Q7Z304 686 aaPredicted RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 AACSQ86V21 672 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 OSTM1Q86WC4 334 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 HERC6Q8IVU3 1022 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 ELOA2Q8IYF1 753 aaPredicted RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 LRRC47Q8N1G4 583 aaKnown RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 REPS2Q8NFH8 660 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 CALML6Q8TD86 181 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 NELL1Q92832 810 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 FBXW5Q969U6 566 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 EAF2Q96CJ1 260 aaPredicted RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 SLF1Q9BQI6 1058 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 RIOK1Q9BRS2 568 aaKnown RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 UBE2ZQ9H832 354 aaPredicted RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 IL1RAPL2Q9NP60 686 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 NRBP1Q9UHY1 535 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 COG5Q9UP83 839 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 INPP5FQ9Y2H2 1132 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 TMX2Q9Y320 296 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 RBM8AQ9Y5S9 174 aaKnown RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 ZNF532Q9HCE3 1301 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 ZNFX1Q9P2E3 1918 aaKnown RBP5.11□□□□□ -1.59
CLIP4-212ENST00000493551 SCN5AQ14524 2016 aa5.11□□□□□ -1.59
CLIP4-212ENST00000493551 MUC3AQ02505 3323 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 GOLGA8BA8MQT2 603 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 MCM3APO60318 1980 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 LPXNO60711 386 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 TNKSO95271 1327 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 NDUFB10O96000 172 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 VAMP1P23763 118 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 CST5P28325 142 aaPredicted RBP5.1□□□□□ -1.59
CLIP4-212ENST00000493551 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
CLIP4-212ENST00000493551 SLFN5Q08AF3 891 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 IKQ13123 557 aaPredicted RBP5.1□□□□□ -1.59
CLIP4-212ENST00000493551 TCTN1Q2MV58 587 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 ALDH1L2Q3SY69 923 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 PRRC2BQ5JSZ5 2229 aaKnown RBP5.1□□□□□ -1.59
CLIP4-212ENST00000493551 RASGRP2Q7LDG7 609 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 MDGA1Q8NFP4 955 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.1□□□□□ -1.59
CLIP4-212ENST00000493551 ASB15Q8WXK1 588 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 ROBO3Q96MS0 1386 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 TEX13BQ9BXU2 312 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 UPF3AQ9H1J1 476 aaKnown RBP5.1□□□□□ -1.59
CLIP4-212ENST00000493551 ALDH8A1Q9H2A2 487 aaPredicted RBP5.1□□□□□ -1.59
CLIP4-212ENST00000493551 PRDM13Q9H4Q3 707 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 SH2D4AQ9H788 454 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 ARHGEF4Q9NR80 690 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 HDAC5Q9UQL6 1122 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 EXOC6BQ9Y2D4 811 aa5.1□□□□□ -1.59
CLIP4-212ENST00000493551 KIF28PB7ZC32 967 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 ZBED4O75132 1171 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 PRDM1O75626 825 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 SSBP05455 408 aaKnown RBP eCLIP5.09□□□□□ -1.59
CLIP4-212ENST00000493551 PYGMP11217 842 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 ACTN1P12814 892 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 ALAS1P13196 640 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 TRIM27P14373 513 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 JAM2P57087 298 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 MTX1Q13505 466 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 CRY1Q16526 586 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 DCAF17Q5H9S7 520 aaPredicted RBP5.09□□□□□ -1.59
CLIP4-212ENST00000493551 FBXO42Q6P3S6 717 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 MTDHQ86UE4 582 aaKnown RBP5.09□□□□□ -1.59
CLIP4-212ENST00000493551 TMEM57Q8N5G2 664 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 CPT1CQ8TCG5 803 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 C17orf80Q9BSJ5 609 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 ABHD16BQ9H3Z7 469 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 RNF146Q9NTX7 359 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 CLIP2Q9UDT6 1046 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 MUTYHQ9UIF7 546 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 RCAN3Q9UKA8 241 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 CBLCQ9ULV8 474 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 SORCS3Q9UPU3 1222 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 ASB1Q9Y576 335 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 INSL6Q9Y581 213 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 SLC4A4Q9Y6R1 1079 aa5.09□□□□□ -1.59
CLIP4-212ENST00000493551 PARP14Q460N5 1801 aa5.09□□□□□ -1.6
CLIP4-212ENST00000493551 BAZ2AQ9UIF9 1905 aaKnown RBP5.08□□□□□ -1.6
CLIP4-212ENST00000493551 C2orf78A6NCI8 922 aa5.08□□□□□ -1.6
CLIP4-212ENST00000493551 F5H6K3 240 aa5.08□□□□□ -1.6
CLIP4-212ENST00000493551 ZNF561-AS1K7EIQ3 104 aa5.08□□□□□ -1.6
CLIP4-212ENST00000493551 AQP7O14520 342 aa5.08□□□□□ -1.6
CLIP4-212ENST00000493551 TRIM24O15164 1050 aa5.08□□□□□ -1.6
CLIP4-212ENST00000493551 DCXO43602 365 aa5.08□□□□□ -1.6
CLIP4-212ENST00000493551 RECQL4O94761 1208 aa5.08□□□□□ -1.6
CLIP4-212ENST00000493551 LAG3P18627 525 aa5.08□□□□□ -1.6
CLIP4-212ENST00000493551 RARSP54136 660 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms