RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ZNF638Q14966 1978 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 SDK1Q7Z5N4 2213 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 MYMKA6NI61 221 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 C1QTNF9BB2RNN3 333 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 TNFRSF10BO14763 440 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 GABRDO14764 452 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 DCLK1O15075 740 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 ITGB3P05106 788 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 C1QTNF9P0C862 333 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 HDCP19113 662 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 CYP2F1P24903 491 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 POLR2BP30876 1174 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 RDXP35241 583 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 HOXD12P35452 270 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 DDIT3P35638 169 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 GPR15P49685 360 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 TFAMQ00059 246 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 ALCAMQ13740 583 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 MCM6Q14566 821 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 CRY1Q16526 586 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 ZC2HC1CQ53FD0 456 aaPredicted RBP11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 LPCAT2Q7L5N7 544 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 OLIG1Q8TAK6 271 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 SH3RF2Q8TEC5 729 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 WHAMMQ8TF30 809 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 SPATA17Q96L03 361 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 PKMYT1Q99640 499 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 NUSAP1Q9BXS6 441 aaKnown RBP11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 GTF3C4Q9UKN8 822 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 L1RE1Q9UN81 338 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 AGAP1Q9UPQ3 857 aa11.79□□□□□ -0.52
SNRNP200-207ENST00000493271 CDX4O14627 284 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 KIAA0391O15091 583 aaKnown RBP11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 PPP1R37O75864 691 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 GAP43P17677 238 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 PLCG1P19174 1290 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 GARTP22102 1010 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 ADSSP30520 456 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 OPRD1P41143 372 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 RBP5P82980 135 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 MYO1EQ12965 1108 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 PREPLQ4J6C6 727 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 ANO7Q6IWH7 933 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 FAM171BQ6P995 826 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 DENND5BQ6ZUT9 1274 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 RABEPKQ7Z6M1 372 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 DDX42Q86XP3 938 aaKnown RBP eCLIP11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 ADGRF2Q8IZF7 708 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 ARL14EPQ8N8R7 260 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 C1orf127Q8N9H9 656 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 MDGA1Q8NFP4 955 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 ACCSQ96QU6 501 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 SLC22A12Q96S37 553 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 CYP2S1Q96SQ9 504 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 STRA6Q9BX79 667 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 TMEM121BQ9BXQ6 578 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 TPSD1Q9BZJ3 242 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 POLR3BQ9NW08 1133 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 RBAKQ9NYW8 714 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 TRPM5Q9NZQ8 1165 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 STK17AQ9UEE5 414 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 NEUROG3Q9Y4Z2 214 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 SNX9Q9Y5X1 595 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 KIAA1549LQ6ZVL6 1849 aa11.78□□□□□ -0.52
SNRNP200-207ENST00000493271 ZZEF1O43149 2961 aa11.77□□□□□ -0.52
SNRNP200-207ENST00000493271 UPK3BL1B0FP48 263 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 TISP43B9A030 160 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 UPK3BL2E5RIL1 263 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 H0Y626 953 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 K7EQS6 105 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 GIPC1O14908 333 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 TRIM16O95361 564 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 ANXA13P27216 316 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 P2RY2P41231 377 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 DHPSP49366 369 aaPredicted RBP11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 SLC7A9P82251 487 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 HNRNPDQ14103 355 aaKnown RBP11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 SURF1Q15526 300 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 C2orf27AQ580R0 203 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 EOGTQ5NDL2 527 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 L1TD1Q5T7N2 865 aaKnown RBP11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 SDHAF4Q5VUM1 108 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 NAIF1Q69YI7 327 aaPredicted RBP11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 BRAPQ7Z569 592 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 SYT12Q8IV01 421 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 SCN4BQ8IWT1 228 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 CSGALNACT2Q8N6G5 542 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 CEP76Q8TAP6 659 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 KCNV2Q8TDN2 545 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 PIGKQ92643 395 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 GATA6Q92908 595 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 PNKPQ96T60 521 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 FAM213AQ9BRX8 229 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 TTLL2Q9BWV7 592 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 MRPL44Q9H9J2 332 aaKnown RBP11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 OLFML3Q9NRN5 406 aa11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 MAGEC2Q9UBF1 373 aaPredicted RBP11.77□□□□□ -0.53
SNRNP200-207ENST00000493271 CCDC39Q9UFE4 941 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms