RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 CELF5Q8N6W0 485 aaKnown RBP19.24■□□□□ 0.67
PTPRU-207ENST00000492954 TMC2Q8TDI7 906 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 USP13Q92995 863 aaPredicted RBP19.24■□□□□ 0.67
PTPRU-207ENST00000492954 NKD2Q969F2 451 aaPredicted RBP19.24■□□□□ 0.67
PTPRU-207ENST00000492954 VRTNQ9H8Y1 702 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 GTSE1Q9NYZ3 720 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 FRMD4BQ9Y2L6 1034 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 R4GN57 208 aa19.24■□□□□ 0.67
PTPRU-207ENST00000492954 CFAP54Q96N23 3096 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 NUP210Q8TEM1 1887 aaPredicted RBP19.23■□□□□ 0.67
PTPRU-207ENST00000492954 A8MXQ7 604 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 KIF20AO95235 890 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 PTPN1P18031 435 aaKnown RBP19.23■□□□□ 0.67
PTPRU-207ENST00000492954 RAP1GAPP47736 663 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 CDH8P55286 799 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 NUCB2P80303 420 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 TNK2Q07912 1038 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 C1orf220Q5T0J3 134 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 FMR1NBQ8N0W7 255 aaPredicted RBP19.23■□□□□ 0.67
PTPRU-207ENST00000492954 GUF1Q8N442 669 aaKnown RBP19.23■□□□□ 0.67
PTPRU-207ENST00000492954 SPATA17Q96L03 361 aa19.23■□□□□ 0.67
PTPRU-207ENST00000492954 C8orf33Q9H7E9 229 aaPredicted RBP19.23■□□□□ 0.67
PTPRU-207ENST00000492954 PTPRZ1P23471 2315 aaPredicted RBP19.22■□□□□ 0.67
PTPRU-207ENST00000492954 NR2F2P24468 414 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 PLCB2Q00722 1185 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 PNOCQ13519 176 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 NFIL3Q16649 462 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 ZACNQ401N2 412 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 ZNF667Q5HYK9 610 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 SV2AQ7L0J3 742 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 B3GALNT2Q8NCR0 500 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 RIN3Q8TB24 985 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 MSANTD3Q96H12 275 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 ZNF518BQ9C0D4 1074 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 SDCBP2Q9H190 292 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 TRPC7Q9HCX4 862 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 TDP1Q9NUW8 608 aa19.22■□□□□ 0.67
PTPRU-207ENST00000492954 THG1LQ9NWX6 298 aaKnown RBP19.22■□□□□ 0.67
PTPRU-207ENST00000492954 F8VP50 259 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 SPECC1L-ADORA2AF8WAN1 911 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 CLDN5O00501 218 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 TRIM66O15016 1216 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 AKAP3O75969 853 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 ANXA13P27216 316 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 CTHP32929 405 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 VAMP7P51809 220 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 CACNA2D1P54289 1103 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 MLLT6P55198 1093 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-207ENST00000492954 USP46P62068 366 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 MTAPQ13126 283 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 SMYD4Q8IYR2 804 aaPredicted RBP19.21■□□□□ 0.67
PTPRU-207ENST00000492954 SLC22A12Q96S37 553 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 B3GNT5Q9BYG0 378 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 CHRDQ9H2X0 955 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 LMAN1LQ9HAT1 526 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 GKN1Q9NS71 199 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 TMEM30AQ9NV96 361 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 WDR87Q6ZQQ6 2873 aa19.21■□□□□ 0.67
PTPRU-207ENST00000492954 GOLGA6L4A6NEF3 574 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 SOBPA7XYQ1 873 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 MAPK13O15264 365 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 TRIM49P0CI25 452 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 TRIM49CP0CI26 452 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 PIK3CAP42336 1068 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 CSTF1Q05048 431 aaKnown RBP19.2■□□□□ 0.66
PTPRU-207ENST00000492954 ZCWPW2Q504Y3 356 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 SPOPLQ6IQ16 392 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 TXNDC11Q6PKC3 985 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 DENND5BQ6ZUT9 1274 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 FAM186BQ8IYM0 893 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 CCDC34Q96HJ3 373 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 C8orf48Q96LL4 319 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 CYP2S1Q96SQ9 504 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 KIF9Q9HAQ2 790 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTPRU-207ENST00000492954 FBXO4Q9UKT5 387 aa19.2■□□□□ 0.66
PTPRU-207ENST00000492954 FAM186AA6NE01 2351 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 TRAV19A0A0A6YYK7 116 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 C2orf78A6NCI8 922 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 IKBKBO14920 756 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 HLA-DRAP01903 254 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 CKMP06732 381 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 CHRNB1P11230 501 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 ADAM9Q13443 819 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 ZNF268Q14587 947 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-207ENST00000492954 SGSM1Q2NKQ1 1148 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 ITPRIPL2Q3MIP1 535 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 WDR44Q5JSH3 913 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 TRIM68Q6AZZ1 485 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 C1orf228Q6PIY5 440 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 ZC3H14Q6PJT7 736 aaKnown RBP19.19■□□□□ 0.66
PTPRU-207ENST00000492954 TSSK4Q6SA08 328 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 RALGPS2Q86X27 583 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-207ENST00000492954 ARL14EPQ8N8R7 260 aaPredicted RBP19.19■□□□□ 0.66
PTPRU-207ENST00000492954 CEP295NLQ96MC4 621 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 FAM83CQ9BQN1 747 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 TTLL2Q9BWV7 592 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 ELOVL4Q9GZR5 314 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 HPS4Q9NQG7 708 aa19.19■□□□□ 0.66
PTPRU-207ENST00000492954 PRMT8Q9NR22 394 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms