RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 UPF2Q9HAU5 1272 aaKnown RBP12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 POLR3BQ9NW08 1133 aaPredicted RBP12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 ABI2Q9NYB9 513 aaPredicted RBP12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 MAGED2Q9UNF1 606 aaPredicted RBP12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 INVSQ9Y283 1065 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 PI4KAP42356 2102 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 CACNA1EQ15878 2313 aa12.02□□□□□ -0.49
CLCNKA-206ENST00000491433 PLXND1Q9Y4D7 1925 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 LAD1O00515 517 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 PIRO00625 290 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 CYB561D2O14569 222 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 OPHN1O60890 802 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 TCF3P15923 654 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 HMGA1P17096 107 aaKnown RBP12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 ENGP17813 658 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 NMT1P30419 496 aaKnown RBP12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 FOSBP53539 338 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 USP4Q13107 963 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 SEMA3BQ13214 749 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 CRY1Q16526 586 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 DUOXA1Q1HG43 343 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 EML3Q32P44 896 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 KIAA1958Q8N8K9 716 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 FAM212AQ96EL1 285 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 TRMT2BQ96GJ1 504 aaKnown RBP12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 RUSC1Q9BVN2 902 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 CCSER1Q9C0I3 900 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 ASB7Q9H672 318 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 DKK4Q9UBT3 224 aa12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 TNRC6BQ9UPQ9 1833 aaKnown RBP12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 UBR5O95071 2799 aaPredicted RBP12.01□□□□□ -0.49
CLCNKA-206ENST00000491433 PTPRDP23468 1912 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 SHROOM3Q8TF72 1996 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 ANO9A1A5B4 782 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 MYMKA6NI61 221 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 SFI1A8K8P3 1242 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 HNRNPDLO14979 420 aaKnown RBP12□□□□□ -0.49
CLCNKA-206ENST00000491433 AP5Z1O43299 807 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 PRPF40AO75400 957 aaKnown RBP12□□□□□ -0.49
CLCNKA-206ENST00000491433 CKMP06732 381 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 PFKLP17858 780 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 BCKDHBP21953 392 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
CLCNKA-206ENST00000491433 CDC25AP30304 524 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 P2RY2P41231 377 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 TNFSF9P41273 254 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 MAPK8P45983 427 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 GUCY2FP51841 1108 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 GFPT1Q06210 699 aaPredicted RBP12□□□□□ -0.49
CLCNKA-206ENST00000491433 TMEM132DQ14C87 1099 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 ZNF77Q15935 545 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 ENOX2Q16206 610 aaKnown RBP12□□□□□ -0.49
CLCNKA-206ENST00000491433 ME3Q16798 604 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 C2orf27AQ580R0 203 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 EOGTQ5NDL2 527 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 LYSMD4Q5XG99 296 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 JADE1Q6IE81 842 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 CCNI2Q6ZMN8 369 aaPredicted RBP12□□□□□ -0.49
CLCNKA-206ENST00000491433 SCUBE3Q8IX30 993 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 NECAB1Q8N987 351 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 MDGA1Q8NFP4 955 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 OLIG1Q8TAK6 271 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 LEO1Q8WVC0 666 aaPredicted RBP12□□□□□ -0.49
CLCNKA-206ENST00000491433 C8orf76Q96K31 380 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 ZNF560Q96MR9 790 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 PYM1Q9BRP8 204 aaKnown RBP12□□□□□ -0.49
CLCNKA-206ENST00000491433 ABCB6Q9NP58 842 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 BCCIPQ9P287 314 aaKnown RBP eCLIP12□□□□□ -0.49
CLCNKA-206ENST00000491433 SLC6A14Q9UN76 642 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 C2CD2Q9Y426 696 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 COL12A1Q99715 3063 aa12□□□□□ -0.49
CLCNKA-206ENST00000491433 PYCARD-AS1I3L0S3 204 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 PPEF2O14830 753 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 DTNBO60941 627 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 PIGRP01833 764 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 SYPP08247 313 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 PRPHP41219 470 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 PNPLA4P41247 253 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 CCR10P46092 362 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 NCKAP1LP55160 1127 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 RIPPLY3P57055 190 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 POU5F1Q01860 360 aaKnown RBP11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 SLC14A1Q13336 389 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 KCNB1Q14721 858 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 SV2CQ496J9 727 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 PREPLQ4J6C6 727 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 PEAR1Q5VY43 1037 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 SLC36A4Q6YBV0 504 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 TTC30AQ86WT1 665 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 C4orf32Q8N8J7 132 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 SYT2Q8N9I0 419 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 FAM181AQ8N9Y4 354 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 EZH1Q92800 747 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 MYRFLQ96LU7 910 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 MSTO1Q9BUK6 570 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 HAPLN2Q9GZV7 340 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 TRPC7Q9HCX4 862 aa11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
CLCNKA-206ENST00000491433 PCDHB9Q9Y5E1 797 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms