RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 TRIM72Q6ZMU5 477 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 INO80BQ9C086 356 aaPredicted RBP11.68□□□□□ -0.54
VPS72-205ENST00000491094 RAB6CQ9H0N0 254 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 ACTL7BQ9Y614 415 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 GJA3Q9Y6H8 435 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 ATRNL1Q5VV63 1379 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 SMNDC1O75940 238 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPS72-205ENST00000491094 PGM1P36871 562 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 CDH6P55285 790 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 SNRPFP62306 86 aaKnown RBP11.68□□□□□ -0.54
VPS72-205ENST00000491094 CNTN2Q02246 1040 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
VPS72-205ENST00000491094 CEP128Q6ZU80 1094 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 TEX2Q8IWB9 1127 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 PPIL6Q8IXY8 311 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 WDR60Q8WVS4 1066 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 NSL1Q96IY1 281 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 SERAC1Q96JX3 654 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 ZCWPW1Q9H0M4 648 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 SMYD3Q9H7B4 428 aa11.68□□□□□ -0.54
VPS72-205ENST00000491094 ARHGAP42A6NI28 874 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 COPEO14579 308 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 MCF2LO15068 1137 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 TYROBPO43914 113 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 RNF8O76064 485 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 LUC7L3O95232 432 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 CALB1P05937 261 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 APRTP07741 180 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 ACVR2BQ13705 512 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 ZNF699Q32M78 642 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 PPP6R3Q5H9R7 873 aaPredicted RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 RNF220Q5VTB9 566 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 CASC4Q6P4E1 433 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 RINLQ6ZS11 566 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.67□□□□□ -0.54
VPS72-205ENST00000491094 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 NSUN6Q8TEA1 469 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 THTPAQ9BU02 230 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 ZNF302Q9NR11 478 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 NR2E3Q9Y5X4 410 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 CCDC22O60826 627 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 TOP3BO95985 862 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 RGS7P49802 495 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 SP2Q02086 613 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 BLMHQ13867 455 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 MROH9Q5TGP6 573 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 PHF13Q86YI8 300 aaPredicted RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 PPFIBP2Q8ND30 876 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 SCG3Q8WXD2 468 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 JDP2Q8WYK2 163 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 SYT15Q9BQS2 421 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 NTPCRQ9BSD7 190 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 TIPINQ9BVW5 301 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 PIDD1Q9HB75 910 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 PCDH9Q9HC56 1237 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 NGRNQ9NPE2 291 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 SENP1Q9P0U3 644 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 KLC1Q07866 573 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 ACSBG2Q5FVE4 666 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 XKR3Q5GH77 459 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 PRPF39Q86UA1 669 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 TRIM50Q86XT4 487 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 RNF149Q8NC42 400 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 SPATS2LQ9NUQ6 558 aaKnown RBP11.67□□□□□ -0.54
VPS72-205ENST00000491094 RNF19AQ9NV58 838 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 NMRK1Q9NWW6 199 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 STOML1Q9UBI4 398 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 WASF2Q9Y6W5 498 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 CNTNAP1P78357 1384 aa11.67□□□□□ -0.54
VPS72-205ENST00000491094 PRPF4O43172 522 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS72-205ENST00000491094 ZC3H11AO75152 810 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS72-205ENST00000491094 ZWINTO95229 277 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 ATP4AP20648 1035 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 TBXAS1P24557 533 aaPredicted RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 IGBP1P78318 339 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 PTP4A2Q12974 167 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 PTPN20Q4JDL3 420 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 TTLL6Q8N841 843 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 PRPF31Q8WWY3 499 aaKnown RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 TSC22D3Q99576 134 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 NMUR2Q9GZQ4 415 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 ARHGAP28Q9P2N2 729 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 VWA5AO00534 786 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 FCHO1O14526 889 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 UGT1A9O60656 530 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 TOM1L1O75674 476 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 RGS20O76081 388 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 ABHD2P08910 425 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 ZNF200P98182 395 aaPredicted RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 OASLQ15646 514 aaKnown RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 FAM102AQ5T9C2 384 aaPredicted RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 OR6B2Q6IFH4 312 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 C4orf50Q6ZRC1 276 aa11.66□□□□□ -0.54
VPS72-205ENST00000491094 CCDC124Q96CT7 223 aaKnown RBP11.66□□□□□ -0.54
VPS72-205ENST00000491094 UGT1A7Q9HAW7 530 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms