RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 MINDY3Q9H8M7 445 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 ARMCX3Q9UH62 379 aaPredicted RBP10.32□□□□□ -0.76
NOD1-208ENST00000489614 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
NOD1-208ENST00000489614 GPR25O00155 361 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 NAT2P11245 290 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 TRIM21P19474 475 aaKnown RBP10.32□□□□□ -0.76
NOD1-208ENST00000489614 TNFRSF8P28908 595 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 PSEN2P49810 448 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 CCR3P51677 355 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 GSTM4Q03013 218 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 CYP24A1Q07973 514 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 MFSD10Q14728 455 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 PTPROQ16827 1216 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 HGSNATQ68CP4 663 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 CEP70Q8NHQ1 597 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 DEPTORQ8TB45 409 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 LRRC8CQ8TDW0 803 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 RUBCNQ92622 972 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 C2orf40Q9H1Z8 148 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 USP15Q9Y4E8 981 aaPredicted RBP10.32□□□□□ -0.76
NOD1-208ENST00000489614 N6AMT1Q9Y5N5 214 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 EXTL3O43909 919 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 KLRC1P26715 233 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 FMO5P49326 533 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 GPC3P51654 580 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 HPCAP84074 193 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 PPP3CAQ08209 521 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 PSMD6Q15008 389 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 SNX30Q5VWJ9 437 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 SLC2A7Q6PXP3 512 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 LRIG3Q6UXM1 1119 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 INTS8Q75QN2 995 aaKnown RBP10.32□□□□□ -0.76
NOD1-208ENST00000489614 ZNF410Q86VK4 478 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 FAM13CQ8NE31 585 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 OSBPL10Q9BXB5 764 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 NEUROG2Q9H2A3 272 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 CEP72Q9P209 647 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 TSC22D4Q9Y3Q8 395 aa10.32□□□□□ -0.76
NOD1-208ENST00000489614 COL4A4P53420 1690 aaPredicted RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 PATJQ8NI35 1801 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 TDRD15B5MCY1 1934 aaKnown RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 ACKR2O00590 384 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 ATP9BO43861 1147 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 CCND3P30281 292 aaPredicted RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 PRMT2P55345 433 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 MGAT3Q09327 533 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 GALNTL6Q49A17 601 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 PDXDC1Q6P996 788 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 TRIM67Q6ZTA4 783 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 ASRGL1Q7L266 308 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 HS2ST1Q7LGA3 356 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 LRRC71Q8N4P6 559 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 SLC43A3Q8NBI5 491 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 CD99L2Q8TCZ2 262 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 LRRC45Q96CN5 670 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 SPATA17Q96L03 361 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 CCDC42Q96M95 316 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 IFIH1Q9BYX4 1025 aaKnown RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 PLAGL2Q9UPG8 496 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 COMMD3-BMI1R4GMX3 469 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 RBAK-RBAKDNI3L0D1 243 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 ZNF263O14978 683 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 DYNC1LI2O43237 492 aaPredicted RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 SUN1O94901 812 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 GSTT2P0CG29 244 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 GSTT2BP0CG30 244 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 IFI35P80217 286 aaPredicted RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 ITIH3Q06033 890 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 RCN1Q15293 331 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 FSCN1Q16658 493 aaKnown RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 KCTD21Q4G0X4 260 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 LIN52Q52LA3 116 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 KLHDC7AQ5VTJ3 777 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 LHX8Q68G74 356 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 GPD1LQ8N335 351 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 CXorf38Q8TB03 319 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 LZICQ8WZA0 190 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 ZNF516Q92618 1163 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 HSPBAP1Q96EW2 488 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 RAB3IPQ96QF0 476 aaPredicted RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 TRIM31Q9BZY9 425 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 NSRP1Q9H0G5 558 aaKnown RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 CNOT10Q9H9A5 744 aaKnown RBP10.31□□□□□ -0.76
NOD1-208ENST00000489614 AIPL1Q9NZN9 384 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 PDP2Q9P2J9 529 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 TNFSF13BQ9Y275 285 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 ALPK3Q96L96 1907 aa10.31□□□□□ -0.76
NOD1-208ENST00000489614 CCDC160A6NGH7 325 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 TCP11X1B4DZS4 312 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 GJB1P08034 283 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 TARSP26639 723 aaKnown RBP10.3□□□□□ -0.76
NOD1-208ENST00000489614 SLCO1A2P46721 670 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 TUFMP49411 452 aaKnown RBP10.3□□□□□ -0.76
NOD1-208ENST00000489614 CLCN3P51790 818 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 SNRNP35Q16560 246 aaKnown RBP10.3□□□□□ -0.76
NOD1-208ENST00000489614 AGBL2Q5U5Z8 902 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 MFSD14CQ5VZR4 134 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 LRRC8BQ6P9F7 803 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 ZNF449Q6P9G9 518 aa10.3□□□□□ -0.76
NOD1-208ENST00000489614 VSIG1Q86XK7 387 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms