RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ATICP31939 592 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 CDH8P55286 799 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 DLG4P78352 724 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 GAS6Q14393 721 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 PON2Q15165 354 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 WDR44Q5JSH3 913 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 TDRD10Q5VZ19 366 aaKnown RBP12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 TRIM68Q6AZZ1 485 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 C1orf228Q6PIY5 440 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 VSTM1Q6UX27 236 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 SLC9A9Q8IVB4 645 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 FSIP1Q8NA03 581 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 RIN3Q8TB24 985 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 SPATA17Q96L03 361 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 FAM83CQ9BQN1 747 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 SCAND2PQ9GZW5 306 aaPredicted RBP12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 GOLPH3LQ9H4A5 285 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 EBF3Q9H4W6 596 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 GDPD2Q9HCC8 539 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 MAPK8IP1Q9UQF2 711 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 PCDHGA2Q9Y5H1 932 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 ATP6V1DQ9Y5K8 247 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 CACNA1IQ9P0X4 2223 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 WDR87Q6ZQQ6 2873 aa12.74□□□□□ -0.37
CCHCR1-215ENST00000488920 TRAV19A0A0A6YYK7 116 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 A0A1W2PQ27 194 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 A0A1W2PQ64 194 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 A0A1W2PQD8 194 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 C2orf78A6NCI8 922 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 OTOL1A6NHN0 477 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 SOBPA7XYQ1 873 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 A8MXQ7 604 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 CLDN5O00501 218 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 PDXKO00764 312 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 VNN1O95497 513 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 STAU1O95793 577 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 ARSAP15289 507 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 ANXA13P27216 316 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 RAP1GAPP47736 663 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 CXCL12P48061 93 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 AP3M2P53677 418 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 USP46P62068 366 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 CLDN10P78369 228 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 SATB1Q01826 763 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 RUNX3Q13761 415 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 NCOA4Q13772 614 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 LRRC32Q14392 662 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 ZNF699Q32M78 642 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 MAMSTRQ6ZN01 415 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 KRBA2Q6ZNG9 492 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 Q6ZS52 159 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 DCLK2Q8N568 766 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 ARL14EPQ8N8R7 260 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 SUMF1Q8NBK3 374 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 ZBTB44Q8NCP5 570 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 TMEM174Q8WUU8 243 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 NELL1Q92832 810 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 HINFPQ9BQA5 517 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 B3GNT5Q9BYG0 378 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 KIF9Q9HAQ2 790 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 HPS4Q9NQG7 708 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 RIF1Q5UIP0 2472 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 F5P12259 2224 aa12.73□□□□□ -0.37
CCHCR1-215ENST00000488920 TCHHQ07283 1943 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 F8VP50 259 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 TRIM66O15016 1216 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 CALUO43852 315 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 ZNF202O95125 648 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 CKMP06732 381 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 USP17L7P0C7H9 530 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 TDGF1P13385 188 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 HDCP19113 662 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 CCR3P51677 355 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 CACNA2D1P54289 1103 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 DPYDQ12882 1025 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 ZNF268Q14587 947 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 ZNF667Q5HYK9 610 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 DGKKQ5KSL6 1271 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 SCARA5Q6ZMJ2 495 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 DENND5BQ6ZUT9 1274 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 SPEM1Q8N4L4 309 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 B3GALNT2Q8NCR0 500 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 CCDC47Q96A33 483 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 C8orf48Q96LL4 319 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 IER2Q9BTL4 223 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 ZNF518BQ9C0D4 1074 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 SDCBP2Q9H190 292 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 TMEM30AQ9NV96 361 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 GCNT4Q9P109 453 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 FRMD4BQ9Y2L6 1034 aa12.72□□□□□ -0.37
CCHCR1-215ENST00000488920 FRYLO94915 3013 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 LILRB5O75023 590 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 RHOBTB3O94955 611 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 ABL1P00519 1130 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 NRLP54845 237 aa12.71□□□□□ -0.37
CCHCR1-215ENST00000488920 FAM160A1Q05DH4 1040 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms