RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ARHGAP20Q9P2F6 1191 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 AFF4Q9UHB7 1163 aaKnown RBP13.05□□□□□ -0.32
TRAIP-209ENST00000488860 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 OBSL1O75147 1896 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
TRAIP-209ENST00000488860 VNN2O95498 520 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 NPR3P17342 541 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 CHRNB2P17787 502 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 ANXA13P27216 316 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 HNRNPH3P31942 346 aaKnown RBP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 EIF4A3P38919 411 aaKnown RBP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 GRIK1P39086 918 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 GPR15P49685 360 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 CLCN4P51793 760 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 CACNA2D1P54289 1103 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 SLC8A3P57103 927 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 BST2Q10589 180 aaKnown RBP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 SMARCB1Q12824 385 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 DUSP4Q13115 394 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 CNGA2Q16280 664 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 MEA1Q16626 185 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 HABP4Q5JVS0 413 aaKnown RBP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 LIN9Q5TKA1 542 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 TPGS2Q68CL5 300 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 SMYD5Q6GMV2 418 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 LCLAT1Q6UWP7 414 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 PAQR9Q6ZVX9 377 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 Q7L0L9 218 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 VPS36Q86VN1 386 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 TTC30AQ86WT1 665 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 C1orf131Q8NDD1 294 aaKnown RBP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 STKLD1Q8NE28 680 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 ZNF461Q8TAF7 563 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 FUBP3Q96I24 572 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 CHP1Q99653 195 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 CRISPLD1Q9H336 500 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 IGFLR1Q9H665 355 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 DMAP1Q9NPF5 467 aaPredicted RBP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 FBXW11Q9UKB1 542 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 PCDHGC3Q9UN70 934 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 YIPF1Q9Y548 306 aa13.04□□□□□ -0.32
TRAIP-209ENST00000488860 BZW2Q9Y6E2 419 aaKnown RBP13.04□□□□□ -0.32
TRAIP-209ENST00000488860 TMCO5BA8MYB1 307 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 TRIM66O15016 1216 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 ABLIM3O94929 683 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 SEC24AO95486 1093 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 HAPLN1P10915 354 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-209ENST00000488860 ATF2P15336 505 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 EPCAMP16422 314 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 RGS7P49802 495 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 PDE4CQ08493 712 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 IFRD2Q12894 506 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-209ENST00000488860 DUSP6Q16828 381 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 CFAP221Q4G0U5 840 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 TCEAL5Q5H9L2 206 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 SDHAF4Q5VUM1 108 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 NAA35Q5VZE5 725 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 CYP26C1Q6V0L0 522 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 CLEC20AQ6ZU45 233 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 ANKRD52Q8NB46 1076 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 KREMEN2Q8NCW0 462 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 SMOQ99835 787 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 BAG1Q99933 345 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-209ENST00000488860 DUSP16Q9BY84 665 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 NHEJ1Q9H9Q4 299 aaPredicted RBP13.03□□□□□ -0.32
TRAIP-209ENST00000488860 ABCB6Q9NP58 842 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 MAN1C1Q9NR34 630 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 TMEM30AQ9NV96 361 aa13.03□□□□□ -0.32
TRAIP-209ENST00000488860 PRRC2BQ5JSZ5 2229 aaKnown RBP13.03□□□□□ -0.32
TRAIP-209ENST00000488860 DENND4CQ5VZ89 1909 aa13.02□□□□□ -0.32
TRAIP-209ENST00000488860 SOWAHDA6NJG2 315 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 F8VP50 259 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 TULP2O00295 520 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 PIK3R2O00459 728 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 DDX3XO00571 662 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRAIP-209ENST00000488860 NRDCO43847 1150 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 AKR1B10O60218 316 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 BEST1O76090 585 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 C8AP07357 584 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
TRAIP-209ENST00000488860 MAGEA11P43364 429 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 KIF11P52732 1056 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 NOMO3P69849 1222 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 TWF1Q12792 350 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 DDR2Q16832 855 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 CLEC16AQ2KHT3 1053 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 VSTM1Q6UX27 236 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 TRIM72Q6ZMU5 477 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 GPR152Q8TDT2 470 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 GIPC2Q8TF65 315 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 CCDC42Q96M95 316 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 PPP1R9BQ96SB3 815 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 KCNK16Q96T55 309 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 PCDHB18PQ96TA0 734 aa13.02□□□□□ -0.33
TRAIP-209ENST00000488860 CDCA3Q99618 268 aaPredicted RBP13.02□□□□□ -0.33
TRAIP-209ENST00000488860 ST7Q9NRC1 585 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms