RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 STK31Q9BXU1 1019 aa5.24□□□□□ -1.57
CNN3-206ENST00000487539 C9orf78Q9NZ63 289 aaPredicted RBP5.24□□□□□ -1.57
CNN3-206ENST00000487539 PPP4R1LQ9P1A2 415 aa5.24□□□□□ -1.57
CNN3-206ENST00000487539 CDH22Q9UJ99 828 aa5.24□□□□□ -1.57
CNN3-206ENST00000487539 USP15Q9Y4E8 981 aaPredicted RBP5.24□□□□□ -1.57
CNN3-206ENST00000487539 FLT1P17948 1338 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 ZZEF1O43149 2961 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 PARP14Q460N5 1801 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 EYA2O00167 538 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 KPNA6O60684 536 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 MAFO75444 373 aaPredicted RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 BAIAP3O94812 1187 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 GLP2RO95838 553 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 APEX1P27695 318 aaKnown RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 RFC2P35250 354 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 STAT3P40763 770 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 TIMM10P62072 90 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 PPP2CBP62714 309 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 GNAI1P63096 354 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 DYNLL1P63167 89 aaKnown RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 PPP2CAP67775 309 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 CNTN2Q02246 1040 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 ALDH6A1Q02252 535 aaKnown RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 TNFAIP2Q03169 654 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 ROM1Q03395 351 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 ATP2B3Q16720 1220 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 RABL6Q3YEC7 729 aaPredicted RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 ZMAT1Q5H9K5 638 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 KANK2Q63ZY3 851 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 TATDN1Q6P1N9 297 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 ARMCX2Q7L311 632 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 TLK2Q86UE8 772 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 DHX37Q8IY37 1157 aaKnown RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 RIN2Q8WYP3 895 aaPredicted RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 ERCC4Q92889 916 aaPredicted RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 RUNDC1Q96C34 613 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 ZDHHC5Q9C0B5 715 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 SLKQ9H2G2 1235 aaPredicted RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 SPC25Q9HBM1 224 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 JADE2Q9NQC1 790 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 AATFQ9NY61 560 aaKnown RBP eCLIP5.23□□□□□ -1.57
CNN3-206ENST00000487539 CTNNA3Q9UI47 895 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 BARX2Q9UMQ3 279 aaPredicted RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 ADAMTS5Q9UNA0 930 aa5.23□□□□□ -1.57
CNN3-206ENST00000487539 CNOT1A5YKK6 2376 aaKnown RBP5.23□□□□□ -1.57
CNN3-206ENST00000487539 TANC1Q9C0D5 1861 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 A0A0G2JNJ9 132 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 A0A1B0GUL7 405 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 UBA6A0AVT1 1052 aaPredicted RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 PPFIA2O75334 1257 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 CABYRO75952 493 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SLC25A27O95847 323 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 F2P00734 622 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 LINC00271P0C7V0 271 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 NCLP19338 710 aaKnown RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 DNAJB1P25685 340 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SHMT1P34896 483 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 NDUFV1P49821 464 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SCNN1BP51168 640 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 HTRA4P83105 476 aaPredicted RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 OCRLQ01968 901 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 ADCY1Q08828 1119 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SART3Q15020 963 aaKnown RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 EIF4HQ15056 248 aaKnown RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 EPHA7Q15375 998 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 ABCB5Q2M3G0 1257 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 TWISTNBQ3B726 338 aaPredicted RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 CERKLQ49MI3 558 aaPredicted RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 GRAMD4Q6IC98 578 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 LRSAM1Q6UWE0 723 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 RTN4RL1Q86UN2 441 aaPredicted RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 PASD1Q8IV76 773 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 ZZZ3Q8IYH5 903 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SUMF1Q8NBK3 374 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SMRP1Q8NCR6 262 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 PHF7Q9BWX1 381 aaPredicted RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 SIL1Q9H173 461 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 DHX36Q9H2U1 1008 aaKnown RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 ABHD16BQ9H3Z7 469 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SEC61A2Q9H9S3 476 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 GNL3LQ9NVN8 582 aaKnown RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 Q9UFV3 132 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SPO11Q9Y5K1 396 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 MICAL3Q7RTP6 2002 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 SMG1Q96Q15 3661 aaKnown RBP5.22□□□□□ -1.57
CNN3-206ENST00000487539 NLRC5Q86WI3 1866 aa5.22□□□□□ -1.57
CNN3-206ENST00000487539 CACNA1IQ9P0X4 2223 aa5.21□□□□□ -1.57
CNN3-206ENST00000487539 IGF2RP11717 2491 aa5.21□□□□□ -1.57
CNN3-206ENST00000487539 NPEPPSL1A6NEC2 478 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 VWA5AO00534 786 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 DVL2O14641 736 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 APAF1O14727 1248 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 CLSTN1O94985 981 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 CXCL10P02778 98 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 MYL3P08590 195 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 HSD3B2P26439 372 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 ADCY8P40145 1251 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 PLCD1P51178 756 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 CD83Q01151 205 aa5.21□□□□□ -1.58
CNN3-206ENST00000487539 DPTQ07507 201 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms