RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 DSG1Q02413 1049 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 CHAF1BQ13112 559 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 CUL4BQ13620 913 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 ACVR2BQ13705 512 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 IKBKEQ14164 716 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 CNN3Q15417 329 aaKnown RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 STK11Q15831 433 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 TSTQ16762 297 aaKnown RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 MTHFSDQ2M296 383 aaKnown RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 PROSER3Q2NL68 480 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 GNPTABQ3T906 1256 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 KBTBD12Q3ZCT8 623 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 CCDC40Q4G0X9 1142 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 BOLA3Q53S33 107 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 HSP90AA5PQ58FG0 334 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 JMJD6Q6NYC1 403 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 FAM117BQ6P1L5 589 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 KCNV1Q6PIU1 500 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 NPNTQ6UXI9 565 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 DDX53Q86TM3 631 aaKnown RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 TRIM74Q86UV6 250 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 TRIM73Q86UV7 250 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 KRT73Q86Y46 540 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 THNSL1Q8IYQ7 743 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 KIAA2013Q8IYS2 634 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 CRIPAKQ8N1N5 446 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 GBP7Q8N8V2 638 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 KCTD6Q8NC69 237 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 CLRN3Q8NCR9 226 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 TRIB2Q92519 343 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 ZUFSPQ96AP4 578 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 TRERF1Q96PN7 1200 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 WDR24Q96S15 920 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 NAP1L3Q99457 506 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 PRRX2Q99811 253 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 CITED2Q99967 270 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 TCF25Q9BQ70 676 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 TUBA1CQ9BQE3 449 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 THUMPD2Q9BTF0 503 aaKnown RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 BTBD1Q9H0C5 482 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 SYNCQ9H7C4 482 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 ERVMER34-1Q9H9K5 563 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 VEZTQ9HBM0 779 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 PDE11AQ9HCR9 933 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 SAMD15Q9P1V8 674 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 IBTKQ9P2D0 1353 aaPredicted RBP5.88□□□□□ -1.47
SF1-217ENST00000486960 SPTA1P02549 2419 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 NBPF19A0A087WUL8 3843 aa5.88□□□□□ -1.47
SF1-217ENST00000486960 PTPRSQ13332 1948 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 DNHD1Q96M86 4753 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 A0A1W2PP55 124 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 RGSL1A5PLK6 1076 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 LRRIQ4A6NIV6 560 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 MEIS3P2A8K0S8 358 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 GTPBP1O00178 669 aaKnown RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 RNMTO43148 476 aaKnown RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 SLITRK3O94933 977 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 SOD2P04179 222 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 S100A6P06703 90 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 SLFN14P0C7P3 912 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ZNF865P0CJ78 1059 aaPredicted RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 NR2F1P10589 423 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 PDGFRAP16234 1089 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 KCNA5P22460 613 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 GPTP24298 496 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 CCND3P30281 292 aaPredicted RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 NNMTP40261 264 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 HNMTP50135 292 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 SCAND1P57086 179 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 RAB15P59190 212 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 YWHAHQ04917 246 aaPredicted RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 GABPB1Q06547 395 aaPredicted RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 GRSF1Q12849 480 aaKnown RBP eCLIP5.87□□□□□ -1.47
SF1-217ENST00000486960 TRIM28Q13263 835 aaKnown RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 PTK2BQ14289 1009 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 MXD4Q14582 209 aaPredicted RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 POLD3Q15054 466 aaPredicted RBP5.87□□□□□ -1.47
SF1-217ENST00000486960 AGERQ15109 404 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ADIPOQQ15848 244 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ZSCAN26Q16670 478 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ADCK5Q3MIX3 580 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 TRIM60Q495X7 471 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 FCRLBQ6BAA4 426 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ACAD10Q6JQN1 1059 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 BLOC1S3Q6QNY0 202 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 THSD4Q6ZMP0 1018 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 RAB11FIP2Q7L804 512 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 CPOQ8IVL8 374 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ANKRD35Q8N283 1001 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 LINC00469Q8N7U9 141 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 GALNT6Q8NCL4 622 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 OR52K1Q8NGK4 314 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 CEP76Q8TAP6 659 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 TBC1D16Q8TBP0 767 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 ACMSDQ8TDX5 336 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 PTP4A1Q93096 173 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 OSBP2Q969R2 916 aa5.87□□□□□ -1.47
SF1-217ENST00000486960 LRRC45Q96CN5 670 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms