RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 DMWDQ09019 674 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 CUL4BQ13620 913 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 PUM1Q14671 1186 aaKnown RBP eCLIP23.97■■□□□ 1.43
SREBF1-214ENST00000486311 PDGFRLQ15198 375 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 TMEM196Q5HYL7 178 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 LONP2Q86WA8 852 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 C12orf56Q8IXR9 622 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 CHFRQ96EP1 664 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 TRPC7Q9HCX4 862 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 SLC39A2Q9NP94 309 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 C2orf42Q9NWW7 574 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 GMEB2Q9UKD1 530 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 CFAP45Q9UL16 551 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 RAB23Q9ULC3 237 aa23.97■■□□□ 1.43
SREBF1-214ENST00000486311 TRAV19A0A0A6YYK7 116 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 CHURC1-FNTBB4DL54 471 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 TACC1O75410 805 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 PDGFRBP09619 1106 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 USP17L7P0C7H9 530 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 ARSAP15289 507 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 HOXA6P31267 233 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 FNTBP49356 437 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 MTF1Q14872 753 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 FSIP1Q8NA03 581 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 MYCBPAPQ8TBZ2 947 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 SLC22A12Q96S37 553 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 MRPL45Q9BRJ2 306 aaKnown RBP23.96■■□□□ 1.43
SREBF1-214ENST00000486311 GZF1Q9H116 711 aaPredicted RBP23.96■■□□□ 1.43
SREBF1-214ENST00000486311 GCNT4Q9P109 453 aa23.96■■□□□ 1.43
SREBF1-214ENST00000486311 TRDMT1O14717 391 aaKnown RBP23.95■■□□□ 1.42
SREBF1-214ENST00000486311 CKMP06732 381 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 TGM1P22735 817 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 BDNFP23560 247 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 CNR2P34972 360 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 GNL1P36915 607 aaPredicted RBP23.95■■□□□ 1.42
SREBF1-214ENST00000486311 AFMP43652 599 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 AMPD2Q01433 879 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 GRSF1Q12849 480 aaKnown RBP eCLIP23.95■■□□□ 1.42
SREBF1-214ENST00000486311 PKP1Q13835 747 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 ZNF77Q15935 545 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 KNOP1Q1ED39 458 aaKnown RBP23.95■■□□□ 1.42
SREBF1-214ENST00000486311 LAIR1Q6GTX8 287 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 FSTL4Q6MZW2 842 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 DGLUCYQ7Z3D6 616 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 PCED1BQ96HM7 432 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 CYP2S1Q96SQ9 504 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 RCOR1Q9UKL0 485 aa23.95■■□□□ 1.42
SREBF1-214ENST00000486311 HRO43593 1189 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 STAU1O95793 577 aaKnown RBP23.94■■□□□ 1.42
SREBF1-214ENST00000486311 GRIK1P39086 918 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 CYP27A1Q02318 531 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 DNM1Q05193 864 aaKnown RBP23.94■■□□□ 1.42
SREBF1-214ENST00000486311 USP4Q13107 963 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 RSPO4Q2I0M5 234 aaPredicted RBP23.94■■□□□ 1.42
SREBF1-214ENST00000486311 WDR72Q3MJ13 1102 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 CEP57L1Q8IYX8 460 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 OSCP1Q8WVF1 389 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 ZNF516Q92618 1163 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 SNX25Q9H3E2 840 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 NME7Q9Y5B8 376 aa23.94■■□□□ 1.42
SREBF1-214ENST00000486311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.93■■□□□ 1.42
SREBF1-214ENST00000486311 C2orf78A6NCI8 922 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 SLFN14P0C7P3 912 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 TCF3P15923 654 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 TNNC1P63316 161 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 SIM2Q14190 667 aaPredicted RBP23.93■■□□□ 1.42
SREBF1-214ENST00000486311 LPAL2Q16609 132 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 MDH1BQ5I0G3 518 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 PRR23BQ6ZRT6 265 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 DENND5BQ6ZUT9 1274 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 GRAMD1CQ8IYS0 662 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 ARL14EPQ8N8R7 260 aaPredicted RBP23.93■■□□□ 1.42
SREBF1-214ENST00000486311 GOLGA5Q8TBA6 731 aa23.93■■□□□ 1.42
SREBF1-214ENST00000486311 DUS2Q9NX74 493 aaKnown RBP23.93■■□□□ 1.42
SREBF1-214ENST00000486311 KIF26AQ9ULI4 1882 aaPredicted RBP23.92■■□□□ 1.42
SREBF1-214ENST00000486311 TRIM66O15016 1216 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 KLRC4O43908 158 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 EXOC3O60645 756 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 RETP07949 1114 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 PFKLP17858 780 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 ANXA13P27216 316 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 ATICP31939 592 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 USP46P62068 366 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 LMNB2Q03252 620 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 TRPC3Q13507 836 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 KCNB1Q14721 858 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 HEATR6Q6AI08 1181 aaKnown RBP23.92■■□□□ 1.42
SREBF1-214ENST00000486311 PKN3Q6P5Z2 889 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 WDR5BQ86VZ2 330 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 CPA6Q8N4T0 437 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 OR6B3Q8NGW1 331 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 C8orf48Q96LL4 319 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 TTLL2Q9BWV7 592 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 XYLT2Q9H1B5 865 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 ECT2Q9H8V3 914 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 PARD6AQ9NPB6 346 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 EHD2Q9NZN4 543 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 SERTAD1Q9UHV2 236 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 USP18Q9UMW8 372 aa23.92■■□□□ 1.42
SREBF1-214ENST00000486311 ARHGAP26Q9UNA1 814 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms