RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 EMILIN2Q9BXX0 1053 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 ZNF518BQ9C0D4 1074 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 NHEJ1Q9H9Q4 299 aaPredicted RBP16.78■□□□□ 0.28
APOE-205ENST00000485628 PCDHB5Q9Y5E4 795 aa16.78■□□□□ 0.28
APOE-205ENST00000485628 A0A087X0T9 212 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 GOLGA6L6A8MZA4 724 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 TGM5O43548 720 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 SEC24AO95486 1093 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 LSM8O95777 96 aaKnown RBP16.77■□□□□ 0.28
APOE-205ENST00000485628 ADH1AP07327 375 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 FAM228BP0C875 321 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 GZMAP12544 262 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 CYP2F1P24903 491 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 NOMO3P69849 1222 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 TSR1Q2NL82 804 aaKnown RBP16.77■□□□□ 0.28
APOE-205ENST00000485628 DENND1BQ6P3S1 775 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 VSTM1Q6UX27 236 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 CYP26C1Q6V0L0 522 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 TRIM72Q6ZMU5 477 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 RTL10Q7L3V2 364 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 ADGRD2Q7Z7M1 963 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 CCDC170Q8IYT3 715 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 TTC9BQ8N6N2 239 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 SMARCD1Q96GM5 515 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 C8orf48Q96LL4 319 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 BAG1Q99933 345 aaPredicted RBP16.77■□□□□ 0.28
APOE-205ENST00000485628 RHOBTB2Q9BYZ6 727 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 PNPLA8Q9NP80 782 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 ZNHIT6Q9NWK9 470 aaKnown RBP16.77■□□□□ 0.28
APOE-205ENST00000485628 IL37Q9NZH6 218 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 FBXW11Q9UKB1 542 aa16.77■□□□□ 0.28
APOE-205ENST00000485628 SZT2Q5T011 3432 aa16.77■□□□□ 0.27
APOE-205ENST00000485628 MYH10P35580 1976 aa16.77■□□□□ 0.27
APOE-205ENST00000485628 PRRC2BQ5JSZ5 2229 aaKnown RBP16.76■□□□□ 0.27
APOE-205ENST00000485628 TULP2O00295 520 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 TNFRSF10BO14763 440 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 ZNF263O14978 683 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 SETSIPP0DME0 302 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 CPB1P15086 417 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 NPR3P17342 541 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 BDNFP23560 247 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 PLA2G4AP47712 749 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 BCAT1P54687 386 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 CENPCQ03188 943 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 PDE4CQ08493 712 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 ADCY1Q08828 1119 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 BST2Q10589 180 aaKnown RBP16.76■□□□□ 0.27
APOE-205ENST00000485628 PTP4A2Q12974 167 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 SLC18A3Q16572 532 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 DUSP6Q16828 381 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 CLEC16AQ2KHT3 1053 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 GOLGA7BQ2TAP0 167 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 RAB41Q5JT25 222 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 TAF3Q5VWG9 929 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 RAD9BQ6WBX8 426 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 SPATA2LQ8IUW3 424 aaPredicted RBP16.76■□□□□ 0.27
APOE-205ENST00000485628 HDAC7Q8WUI4 952 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 KCTD13Q8WZ19 329 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 CEP295NLQ96MC4 621 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 SLC4A5Q9BY07 1137 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 ISCUQ9H1K1 167 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 KCNF1Q9H3M0 494 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 CYLDQ9NQC7 956 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 ADAMTS1Q9UHI8 967 aa16.76■□□□□ 0.27
APOE-205ENST00000485628 XPO1O14980 1071 aaKnown RBP16.75■□□□□ 0.27
APOE-205ENST00000485628 TNFAIP3P21580 790 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 ADORA2BP29275 332 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 GABRB2P47870 512 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 DUSP4Q13115 394 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 ADGRE1Q14246 886 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 COL19A1Q14993 1142 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 PTPROQ16827 1216 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 PMF1Q6P1K2 205 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 TMEM184AQ6ZMB5 413 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 TMEM110Q86TL2 294 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 PHF13Q86YI8 300 aaPredicted RBP16.75■□□□□ 0.27
APOE-205ENST00000485628 UBA3Q8TBC4 463 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 SECISBP2LQ93073 1101 aaKnown RBP16.75■□□□□ 0.27
APOE-205ENST00000485628 SPATA17Q96L03 361 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 PGLYRP2Q96PD5 576 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 KCNK16Q96T55 309 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 PRDM12Q9H4Q4 367 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 TAS2R14Q9NYV8 317 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 NAGPAQ9UK23 515 aa16.75■□□□□ 0.27
APOE-205ENST00000485628 REV3LO60673 3130 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 SOWAHDA6NJG2 315 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 AP1G2O75843 785 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 FAM200BP0CF97 657 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 KLRC2P26717 231 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 SSTR3P32745 418 aaPredicted RBP16.74■□□□□ 0.27
APOE-205ENST00000485628 ARPP19P56211 112 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
APOE-205ENST00000485628 HABP4Q5JVS0 413 aaKnown RBP16.74■□□□□ 0.27
APOE-205ENST00000485628 ACAD10Q6JQN1 1059 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 SCML4Q8N228 414 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 TMEM35BQ8NCS4 154 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 CCDC112Q8NEF3 446 aa16.74■□□□□ 0.27
APOE-205ENST00000485628 MICAL1Q8TDZ2 1067 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms