RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 VCPKMTQ9H867 229 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 TRIM39Q9HCM9 518 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 ARHGEF4Q9NR80 690 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 TRMT13Q9NUP7 481 aaKnown RBP7.39□□□□□ -1.23
CLK1-212ENST00000482590 FTSJ1Q9UET6 329 aa7.39□□□□□ -1.23
CLK1-212ENST00000482590 LAMA2P24043 3122 aaKnown RBP7.38□□□□□ -1.23
CLK1-212ENST00000482590 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 A0A1B0GVC2 190 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 TCRBV5S4A2TA0A5A2 114 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 SEPT4O43236 478 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 PRKD3O94806 890 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 CPP00450 1065 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 AMHP03971 560 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 HSD3B1P14060 373 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 CCND1P24385 295 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 ADD2P35612 726 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 RECQLP46063 649 aaPredicted RBP7.38□□□□□ -1.23
CLK1-212ENST00000482590 NFATC3Q12968 1075 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 INAVAQ3KP66 663 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 SV2CQ496J9 727 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 GJC2Q5T442 439 aaPredicted RBP7.38□□□□□ -1.23
CLK1-212ENST00000482590 SLFN13Q68D06 897 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 TMC5Q6UXY8 1006 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 Q7L0L9 218 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 SKAP1Q86WV1 359 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 OR8H2Q8N162 312 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 NKAIN3Q8N8D7 197 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 NAXEQ8NCW5 288 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 ACRBPQ8NEB7 543 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 RSPH1Q8WYR4 309 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 CCDC17Q96LX7 622 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 CCDC140Q96MF4 163 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 MEGF9Q9H1U4 602 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 C1orf112Q9NSG2 853 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 CLDND1Q9NY35 253 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 ARPP21Q9UBL0 812 aaPredicted RBP7.38□□□□□ -1.23
CLK1-212ENST00000482590 ACAD8Q9UKU7 415 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 ATP11BQ9Y2G3 1177 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 TMX2Q9Y320 296 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 SLC4A4Q9Y6R1 1079 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 LCTP09848 1927 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 UNC80Q8N2C7 3258 aa7.38□□□□□ -1.23
CLK1-212ENST00000482590 ROBO3Q96MS0 1386 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 K7ENM7 598 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 PRKAB2O43741 272 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 TLR5O60602 858 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 FZD7O75084 574 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 SLC25A27O95847 323 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 LTFP02788 710 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 ASLP04424 464 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 PYGMP11217 842 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 FCER1AP12319 257 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 ATP5JP18859 108 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 GFRA1P56159 465 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 UBE3CQ15386 1083 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 SPECC1Q5M775 1068 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 TRMT10BQ6PF06 316 aaKnown RBP7.37□□□□□ -1.23
CLK1-212ENST00000482590 MYLK4Q86YV6 388 aaPredicted RBP7.37□□□□□ -1.23
CLK1-212ENST00000482590 ABRAQ8N0Z2 381 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 TMEM145Q8NBT3 493 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 TRPV1Q8NER1 839 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 C1orf159Q96HA4 380 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 MAML3Q96JK9 1138 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 NUP88Q99567 741 aaPredicted RBP7.37□□□□□ -1.23
CLK1-212ENST00000482590 EIF2AK1Q9BQI3 630 aaKnown RBP7.37□□□□□ -1.23
CLK1-212ENST00000482590 LRRCC1Q9C099 1032 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 CDIP1Q9H305 208 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 KIAA1586Q9HCI6 787 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 MYOTQ9UBF9 498 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 STXBP5LQ9Y2K9 1186 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 ZDHHC9Q9Y397 364 aa7.37□□□□□ -1.23
CLK1-212ENST00000482590 LAMA4Q16363 1823 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 MYO9BQ13459 2157 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 ITIH6Q6UXX5 1313 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 CYP2D7A0A087X1C5 515 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 A0A1W2PQU0 124 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 OVOL3O00110 214 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 AGRPO00253 132 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 DGKIO75912 1065 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 MTA2O94776 668 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 MYBL2P10244 700 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 RARBP10826 455 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 EEF2P13639 858 aaKnown RBP7.36□□□□□ -1.23
CLK1-212ENST00000482590 ID4P47928 161 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 KCNJ6P48051 423 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 SELENOPP49908 381 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 PDCD2Q16342 344 aaPredicted RBP7.36□□□□□ -1.23
CLK1-212ENST00000482590 TUBB8Q3ZCM7 444 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 TRIM60Q495X7 471 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 ATP13A4Q4VNC1 1196 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 FAM47AQ5JRC9 791 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 C12orf60Q5U649 245 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 PROSER1Q86XN7 944 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 GOLGA1Q92805 767 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 SMOC1Q9H4F8 434 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 EPB41L1Q9H4G0 881 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 BARX1Q9HBU1 254 aaPredicted RBP7.36□□□□□ -1.23
CLK1-212ENST00000482590 ZBTB40Q9NUA8 1239 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 HSPBP1Q9NZL4 362 aa7.36□□□□□ -1.23
CLK1-212ENST00000482590 TNPO3Q9Y5L0 923 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms