RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 ADGRG5Q8IZF4 528 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 CACNA2D3Q8IZS8 1091 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.18□□□□□ -1.42
UPF3A-207ENST00000481131 MYRIPQ8NFW9 859 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 EVI5LQ96CN4 794 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 LOXL4Q96JB6 756 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 EIF2AQ9BY44 585 aaKnown RBP6.18□□□□□ -1.42
UPF3A-207ENST00000481131 CXorf36Q9H7Y0 433 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 HEYLQ9NQ87 328 aaPredicted RBP6.18□□□□□ -1.42
UPF3A-207ENST00000481131 TM7SF3Q9NS93 570 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 LUZP4Q9P127 313 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 SHOC2Q9UQ13 582 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 CDY1Q9Y6F8 540 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 AQP12BA6NM10 295 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 LGALS16A8MUM7 142 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 FAM20BO75063 409 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
UPF3A-207ENST00000481131 NR4A1P22736 598 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 GRK6P43250 576 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 PXNP49023 591 aaPredicted RBP6.17□□□□□ -1.42
UPF3A-207ENST00000481131 DGKEP52429 567 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 ITGA8P53708 1063 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 KRT17Q04695 432 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 KCNAB1Q14722 419 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 RAB30Q15771 203 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 INSCQ1MX18 579 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 PTCHD3Q3KNS1 767 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 MGAT5BQ3V5L5 792 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 ZACNQ401N2 412 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 VPS53Q5VIR6 699 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 RAP1GAP2Q684P5 730 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 FBXO38Q6PIJ6 1188 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 CLNKQ7Z7G1 428 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 TMPRSS6Q8IU80 811 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 BPIFB1Q8TDL5 484 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 SLC46A2Q9BY10 475 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.17□□□□□ -1.42
UPF3A-207ENST00000481131 DEF6Q9H4E7 631 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 AGO4Q9HCK5 861 aaKnown RBP6.17□□□□□ -1.42
UPF3A-207ENST00000481131 AKIP1Q9NQ31 210 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 RNF181Q9P0P0 153 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 GRHPRQ9UBQ7 328 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 MTO1Q9Y2Z2 717 aaKnown RBP6.17□□□□□ -1.42
UPF3A-207ENST00000481131 NEU2Q9Y3R4 380 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 ABCA5Q8WWZ7 1642 aa6.17□□□□□ -1.42
UPF3A-207ENST00000481131 CHD1O14646 1710 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 CCDC189A1A4V9 331 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 SKAP2O75563 359 aaPredicted RBP6.16□□□□□ -1.42
UPF3A-207ENST00000481131 RECQL4O94761 1208 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 INMTO95050 263 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 VEGFAP15692 232 aaPredicted RBP6.16□□□□□ -1.42
UPF3A-207ENST00000481131 TPH1P17752 444 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 ITGALP20701 1170 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 LRPAP1P30533 357 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 NDUFV1P49821 464 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 SLC25A3Q00325 362 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 PDCD2Q16342 344 aaPredicted RBP6.16□□□□□ -1.42
UPF3A-207ENST00000481131 ZNF750Q32MQ0 723 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 BEAN1Q3B7T3 259 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 ARHGAP15Q53QZ3 475 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 CACHD1Q5VU97 1274 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 LAYNQ6UX15 382 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 LDHAL6AQ6ZMR3 332 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 FAM9AQ8IZU1 332 aaPredicted RBP6.16□□□□□ -1.42
UPF3A-207ENST00000481131 ATG16L2Q8NAA4 619 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 TMEM125Q96AQ2 219 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 RNF31Q96EP0 1072 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 SNX27Q96L92 541 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 RMDN3Q96TC7 470 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 ADAM2Q99965 735 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 PTDSS2Q9BVG9 487 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.16□□□□□ -1.42
UPF3A-207ENST00000481131 KLC2Q9H0B6 622 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 NECTIN3Q9NQS3 549 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 ZSCAN32Q9NX65 697 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 CEP72Q9P209 647 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 NDRG4Q9ULP0 352 aaKnown RBP6.16□□□□□ -1.42
UPF3A-207ENST00000481131 TCAF1Q9Y4C2 921 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 SPATA31A3Q5VYP0 1347 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 SOGA1O94964 1423 aa6.16□□□□□ -1.42
UPF3A-207ENST00000481131 AQRO60306 1485 aaKnown RBP eCLIP6.15□□□□□ -1.42
UPF3A-207ENST00000481131 hCG_1642624A0A1W2PR95 340 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 RNASET2O00584 256 aaKnown RBP6.15□□□□□ -1.42
UPF3A-207ENST00000481131 SOAT2O75908 522 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 FGAP02671 866 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 CSF1RP07333 972 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 PPIFP30405 207 aaKnown RBP6.15□□□□□ -1.42
UPF3A-207ENST00000481131 NPTX2P47972 431 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 RPS7P62081 194 aaKnown RBP6.15□□□□□ -1.42
UPF3A-207ENST00000481131 RAPGEF1Q13905 1077 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 SPARCL1Q14515 664 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 PRKD1Q15139 912 aaPredicted RBP6.15□□□□□ -1.42
UPF3A-207ENST00000481131 RBM20Q5T481 1227 aaKnown RBP6.15□□□□□ -1.42
UPF3A-207ENST00000481131 FAM109AQ8N4B1 249 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 IL17DQ8TAD2 202 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 STYXQ8WUJ0 223 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 PPP2R3CQ969Q6 453 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 ALOXE3Q9BYJ1 711 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.42
UPF3A-207ENST00000481131 PCDHAC1Q9H158 963 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms