RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 POMKQ9H5K3 350 aa7.17□□□□□ -1.26
LRCH3-216ENST00000481048 ZNF552Q9H707 407 aaPredicted RBP7.17□□□□□ -1.26
LRCH3-216ENST00000481048 ZSWIM4Q9H7M6 989 aa7.17□□□□□ -1.26
LRCH3-216ENST00000481048 RSAD1Q9HA92 442 aa7.17□□□□□ -1.26
LRCH3-216ENST00000481048 PARD6AQ9NPB6 346 aa7.17□□□□□ -1.26
LRCH3-216ENST00000481048 MRPL17Q9NRX2 175 aaKnown RBP7.17□□□□□ -1.26
LRCH3-216ENST00000481048 EBF1Q9UH73 591 aa7.17□□□□□ -1.26
LRCH3-216ENST00000481048 CNOT6Q9ULM6 557 aaKnown RBP7.17□□□□□ -1.26
LRCH3-216ENST00000481048 EP300Q09472 2414 aaPredicted RBP7.17□□□□□ -1.26
LRCH3-216ENST00000481048 SPTBN4Q9H254 2564 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 TEX51A0A1B0GUA7 166 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-216ENST00000481048 SHISA3A0PJX4 238 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 TMEM150BA6NC51 233 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 PSPNO60542 156 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 PFKFB2O60825 505 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 ERLIN2O94905 339 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 LYPLA2O95372 231 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 KLRC2P26717 231 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 GALK1P51570 392 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 CLCN4P51793 760 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 PTENP60484 403 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 TCF15Q12870 199 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 DUSP4Q13115 394 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 STK3Q13188 491 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 TFDP1Q14186 410 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 NOTUMQ6P988 496 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 BNC2Q6ZN30 1099 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-216ENST00000481048 PIK3AP1Q6ZUJ8 805 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 OTOP3Q7RTS5 596 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 GPR149Q86SP6 731 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 CABP7Q86V35 215 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 HACE1Q8IYU2 909 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 TDRD5Q8NAT2 981 aaKnown RBP7.16□□□□□ -1.26
LRCH3-216ENST00000481048 RNF149Q8NC42 400 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 PRSS33Q8NF86 280 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 CMASQ8NFW8 434 aaPredicted RBP7.16□□□□□ -1.26
LRCH3-216ENST00000481048 HDAC7Q8WUI4 952 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 PRPF31Q8WWY3 499 aaKnown RBP7.16□□□□□ -1.26
LRCH3-216ENST00000481048 KREMEN1Q96MU8 473 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 AIFM3Q96NN9 605 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 KLHL5Q96PQ7 755 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 HSD17B14Q9BPX1 270 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 SH2D3AQ9BRG2 576 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 LXNQ9BS40 222 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 NFKBIZQ9BYH8 718 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 ZCCHC4Q9H5U6 513 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 SFXN1Q9H9B4 322 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 BRMS1Q9HCU9 246 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 ANKEF1Q9NU02 776 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 DBR1Q9UK59 544 aaKnown RBP7.16□□□□□ -1.26
LRCH3-216ENST00000481048 PCDHA12Q9UN75 941 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 KCNJ14Q9UNX9 436 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 GIT1Q9Y2X7 761 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 CITO14578 2027 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 ZMYM2Q9UBW7 1377 aa7.16□□□□□ -1.26
LRCH3-216ENST00000481048 ZFHX2Q9C0A1 2572 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-216ENST00000481048 PLXNA3P51805 1871 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 MYH11P35749 1972 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 F5P12259 2224 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 C2CD4DB7Z1M9 353 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 PROB1E7EW31 1015 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 NRP1O14786 923 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 CILPO75339 1184 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 DDHD2O94830 711 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 SLITRK3O94933 977 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 SOD2P04179 222 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 SRGAP2CP0DJJ0 459 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 ITGA4P13612 1032 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 CA8P35219 290 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 SLC11A1P49279 550 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 CLCN5P51795 746 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 TEKQ02763 1124 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 SPIRE1Q08AE8 756 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 EMC2Q15006 297 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 PTPN14Q15678 1187 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 CLEC16AQ2KHT3 1053 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 XKR9Q5GH70 373 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 UBXN11Q5T124 520 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 RARS2Q5T160 578 aaKnown RBP7.15□□□□□ -1.26
LRCH3-216ENST00000481048 PLA2G4FQ68DD2 849 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 TMEM173Q86WV6 379 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-216ENST00000481048 ZNF280BQ86YH2 543 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 TPH2Q8IWU9 490 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 ANKS4BQ8N8V4 417 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 LPPQ93052 612 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 RELTQ969Z4 430 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 TMEM143Q96AN5 459 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 APOL5Q9BWW9 433 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 GBP3Q9H0R5 595 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 CSRNP2Q9H175 543 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 PLEKHA4Q9H4M7 779 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 MINDY3Q9H8M7 445 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 IGSF9Q9P2J2 1179 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 WRAP73Q9P2S5 460 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-216ENST00000481048 ORC3Q9UBD5 711 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-216ENST00000481048 DNAJB4Q9UDY4 337 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 KLHL3Q9UH77 587 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 INPP5FQ9Y2H2 1132 aa7.15□□□□□ -1.26
LRCH3-216ENST00000481048 FANCMQ8IYD8 2048 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms