RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 S1PR5Q9H228 398 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
TRA2B-212ENST00000480461 CDH22Q9UJ99 828 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 FBXW11Q9UKB1 542 aa13.02□□□□□ -0.33
TRA2B-212ENST00000480461 TPM2P07951 284 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 CLCN1P35523 988 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 MFAP3P55082 362 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 TPM4P67936 248 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 DRAP1Q14919 205 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-212ENST00000480461 ANKRD54Q6NXT1 300 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 TMEM270Q6UE05 265 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 PPFIBP1Q86W92 1011 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 DCP1BQ8IZD4 617 aaKnown RBP13.01□□□□□ -0.33
TRA2B-212ENST00000480461 SHC3Q92529 594 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 JAKMIP2Q96AA8 810 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 ZNF707Q96C28 371 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-212ENST00000480461 APOL5Q9BWW9 433 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 NT5C1AQ9BXI3 368 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 CYP4F11Q9HBI6 524 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 MAN1C1Q9NR34 630 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 PCDHB4Q9Y5E5 795 aa13.01□□□□□ -0.33
TRA2B-212ENST00000480461 A0A1W2PQC6 194 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 ZMYND10O75800 440 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 BEST1O76090 585 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 PAPLNO95428 1278 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 CFHP08603 1231 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 HAPLN1P10915 354 aaPredicted RBP13□□□□□ -0.33
TRA2B-212ENST00000480461 CCDC130P13994 396 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 BDNFP23560 247 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 GPR15P49685 360 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 POLR2FP61218 127 aaKnown RBP13□□□□□ -0.33
TRA2B-212ENST00000480461 TSPY1Q01534 308 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 FILIP1LQ4L180 1135 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 PPP1R26Q5T8A7 1209 aaPredicted RBP13□□□□□ -0.33
TRA2B-212ENST00000480461 SDHAF4Q5VUM1 108 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 FAM71AQ8IYT1 594 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 TMEM105Q8N8V8 129 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 SLC7A14Q8TBB6 771 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 HDAC7Q8WUI4 952 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 MYLPFQ96A32 169 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 CYFIP2Q96F07 1278 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 HEXIM2Q96MH2 286 aaKnown RBP13□□□□□ -0.33
TRA2B-212ENST00000480461 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 STK33Q9BYT3 514 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 ZNF518BQ9C0D4 1074 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 PLEKHA4Q9H4M7 779 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 FAM124BQ9H5Z6 455 aaPredicted RBP13□□□□□ -0.33
TRA2B-212ENST00000480461 NLRC4Q9NPP4 1024 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 FAM49BQ9NUQ9 324 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 ABI2Q9NYB9 513 aaPredicted RBP13□□□□□ -0.33
TRA2B-212ENST00000480461 CEP72Q9P209 647 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 PCDHB5Q9Y5E4 795 aa13□□□□□ -0.33
TRA2B-212ENST00000480461 CCDC195A0A1B0GUA6 201 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 NRG2O14511 850 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-212ENST00000480461 CYP26A1O43174 497 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 C8AP07357 584 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 ATF6P18850 670 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 SP100P23497 879 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-212ENST00000480461 JAM2P57087 298 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 CYP27A1Q02318 531 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 NFE2Q16621 373 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-212ENST00000480461 DDR2Q16832 855 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 SARM1Q6SZW1 724 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 TMC5Q6UXY8 1006 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 ENOSF1Q7L5Y1 443 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-212ENST00000480461 STKLD1Q8NE28 680 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 ZMIZ2Q8NF64 920 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 GPR152Q8TDT2 470 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 BAP1Q92560 729 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 TNIP3Q96KP6 325 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 KCNK16Q96T55 309 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 HNRNPABQ99729 332 aaKnown RBP12.99□□□□□ -0.33
TRA2B-212ENST00000480461 TTYH3Q9C0H2 523 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 MAFFQ9ULX9 164 aa12.99□□□□□ -0.33
TRA2B-212ENST00000480461 DMXL1Q9Y485 3027 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 FSD2A1L4K1 749 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 GABBR2O75899 941 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 PAEPP09466 180 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 KRT5P13647 590 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 SMARCB1Q12824 385 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 RAPGEF1Q13905 1077 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 CFAP221Q4G0U5 840 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 POTEHQ6S545 545 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 SPATA2LQ8IUW3 424 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-212ENST00000480461 TTC39CQ8N584 583 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 NEK11Q8NG66 645 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 SPPL2BQ8TCT7 592 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 CASP10Q92851 521 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 NKD2Q969F2 451 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-212ENST00000480461 PCMTD1Q96MG8 357 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-212ENST00000480461 SMOQ99835 787 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 ABCB6Q9NP58 842 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 HCFC1R1Q9NWW0 138 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 HSFX1Q9UBD0 423 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 INSL5Q9Y5Q6 135 aa12.98□□□□□ -0.33
TRA2B-212ENST00000480461 ZNF292O60281 2723 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms