RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 CASS4Q9NQ75 786 aa5.38□□□□□ -1.55
SSR1-207ENST00000479485 A1CFQ9NQ94 594 aaKnown RBP5.38□□□□□ -1.55
SSR1-207ENST00000479485 CHST12Q9NRB3 414 aa5.38□□□□□ -1.55
SSR1-207ENST00000479485 C11orf21Q9P2W6 132 aa5.38□□□□□ -1.55
SSR1-207ENST00000479485 SHOC2Q9UQ13 582 aa5.38□□□□□ -1.55
SSR1-207ENST00000479485 HS3ST3A1Q9Y663 406 aa5.38□□□□□ -1.55
SSR1-207ENST00000479485 EIF3AQ14152 1382 aaKnown RBP5.38□□□□□ -1.55
SSR1-207ENST00000479485 CCDC7Q96M83 1385 aa5.38□□□□□ -1.55
SSR1-207ENST00000479485 TRIAP1O43715 76 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 CASP5P51878 434 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 HMGN5P82970 282 aaKnown RBP5.37□□□□□ -1.55
SSR1-207ENST00000479485 KRT17Q04695 432 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 IFIT5Q13325 482 aaKnown RBP5.37□□□□□ -1.55
SSR1-207ENST00000479485 SF3B3Q15393 1217 aaKnown RBP5.37□□□□□ -1.55
SSR1-207ENST00000479485 SYCP2LQ5T4T6 812 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 ABHD17BQ5VST6 288 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 ZNF627Q7L945 461 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 ZNF280BQ86YH2 543 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 VRK3Q8IV63 474 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 LCORLQ8N3X6 602 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 SLC44A3Q8N4M1 653 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 B3GALNT2Q8NCR0 500 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 LPIN2Q92539 896 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 SPSB4Q96A44 273 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 Q96MF0 132 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 OSBPL9Q96SU4 736 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 MESP1Q9BRJ9 268 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 UNKQ9C0B0 810 aaKnown RBP5.37□□□□□ -1.55
SSR1-207ENST00000479485 KCTD5Q9NXV2 234 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 PHTF1Q9UMS5 762 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 TBC1D30Q9Y2I9 924 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 SPATA31A3Q5VYP0 1347 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 MAPK8IP3Q9UPT6 1336 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 NINLQ9Y2I6 1382 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 RAPGEF2Q9Y4G8 1499 aa5.37□□□□□ -1.55
SSR1-207ENST00000479485 GRID2IPA4D2P6 1211 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 POM121BA6NF01 834 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 FOXN3O00409 490 aaPredicted RBP5.36□□□□□ -1.55
SSR1-207ENST00000479485 RASSF9O75901 435 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 SRGNP10124 158 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 HSPA5P11021 654 aaKnown RBP5.36□□□□□ -1.55
SSR1-207ENST00000479485 CYP2C9P11712 490 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 IL1R1P14778 569 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 TSHRP16473 764 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 TM4SF4P48230 202 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 IRX3P78415 501 aaPredicted RBP5.36□□□□□ -1.55
SSR1-207ENST00000479485 SATB1Q01826 763 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 DAG1Q14118 895 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 ZIK1Q3SY52 487 aaPredicted RBP5.36□□□□□ -1.55
SSR1-207ENST00000479485 PLA1AQ53H76 456 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 DNTTIP2Q5QJE6 756 aaKnown RBP5.36□□□□□ -1.55
SSR1-207ENST00000479485 ARHGAP40Q5TG30 622 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 SASS6Q6UVJ0 657 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 ZDHHC24Q6UX98 284 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 Q6YL49 198 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 TSHZ1Q6ZSZ6 1077 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 GAS2L3Q86XJ1 694 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 CREBRFQ8IUR6 639 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 LNX2Q8N448 690 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.36□□□□□ -1.55
SSR1-207ENST00000479485 BEND2Q8NDZ0 799 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 EXOC6Q8TAG9 804 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 MYCBPAPQ8TBZ2 947 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 TPSD1Q9BZJ3 242 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 CHMP4BQ9H444 224 aaKnown RBP5.36□□□□□ -1.55
SSR1-207ENST00000479485 CHMP5Q9NZZ3 219 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.36□□□□□ -1.55
SSR1-207ENST00000479485 RUSC2Q8N2Y8 1516 aa5.36□□□□□ -1.55
SSR1-207ENST00000479485 POLR1AO95602 1720 aaPredicted RBP5.35□□□□□ -1.55
SSR1-207ENST00000479485 TIAM1Q13009 1591 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 MIA2Q96PC5 1412 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 BRD4O60885 1362 aaPredicted RBP5.35□□□□□ -1.55
SSR1-207ENST00000479485 IBTKQ9P2D0 1353 aaPredicted RBP5.35□□□□□ -1.55
SSR1-207ENST00000479485 hCG_1984214I3L0E3 225 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 CLGNO14967 610 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 ZNF500O60304 480 aaPredicted RBP5.35□□□□□ -1.55
SSR1-207ENST00000479485 IL18RAPO95256 599 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 PARP1P09874 1014 aaKnown RBP5.35□□□□□ -1.55
SSR1-207ENST00000479485 PPIFP30405 207 aaKnown RBP5.35□□□□□ -1.55
SSR1-207ENST00000479485 CARSP49589 748 aaKnown RBP5.35□□□□□ -1.55
SSR1-207ENST00000479485 HNRNPMP52272 730 aaKnown RBP eCLIP5.35□□□□□ -1.55
SSR1-207ENST00000479485 ZNF543Q08ER8 600 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 MGAT5BQ3V5L5 792 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 C11orf96Q7Z7L8 435 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 FAM109AQ8N4B1 249 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 CCDC33Q8N5R6 958 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 TOR1AIP2Q8NFQ8 470 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 FAM136AQ96C01 138 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 PPP1R9BQ96SB3 815 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 STRBPQ96SI9 672 aaKnown RBP5.35□□□□□ -1.55
SSR1-207ENST00000479485 AIFM2Q9BRQ8 373 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 PTDSS2Q9BVG9 487 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 BRIP1Q9BX63 1249 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 ACTRT3Q9BYD9 372 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 CYP4F11Q9HBI6 524 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 MID2Q9UJV3 735 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 SERTAD3Q9UJW9 196 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 ITGB1BP2Q9UKP3 347 aa5.35□□□□□ -1.55
SSR1-207ENST00000479485 HDAC9Q9UKV0 1011 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms