RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 PRIM2P49643 509 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 RARRES1P49788 294 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 CLCN2P51788 898 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 KRT17Q04695 432 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 ZNF543Q08ER8 600 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 NPY5RQ15761 445 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 TBCCQ15814 346 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 LY6KQ17RY6 165 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 PRR16Q569H4 304 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 UNC13DQ70J99 1090 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 DTX2Q86UW9 622 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 CCAR1Q8IX12 1150 aaKnown RBP4.8□□□□□ -1.64
CCNL1-220ENST00000478454 SIMC1Q8NDZ2 872 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 BPIFB1Q8TDL5 484 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 PPP2R3CQ969Q6 453 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 SPSB4Q96A44 273 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 TBCBQ99426 244 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 XPNPEP3Q9NQH7 507 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 CHST12Q9NRB3 414 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 IL17RBQ9NRM6 502 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 LRIT1Q9P2V4 623 aa4.8□□□□□ -1.64
CCNL1-220ENST00000478454 FNDC1Q4ZHG4 1894 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-220ENST00000478454 MBD3L4A6NDZ8 208 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-220ENST00000478454 MBD3L3A6NE82 208 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-220ENST00000478454 RHPN2P1A8MT19 583 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 KIAA0355O15063 1070 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 VNN1O95497 513 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 LMNAP02545 664 aaKnown RBP4.79□□□□□ -1.64
CCNL1-220ENST00000478454 MYL3P08590 195 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 NR2F6P10588 404 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 XRCC6P12956 609 aaKnown RBP eCLIP4.79□□□□□ -1.64
CCNL1-220ENST00000478454 KLRC1P26715 233 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 LRPAP1P30533 357 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 CXCR5P32302 372 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 GRIA3P42263 894 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 CASP5P51878 434 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 E2F2Q14209 437 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 NBPF8Q3BBV2 869 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 MGAT5BQ3V5L5 792 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 MAP9Q49MG5 647 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 SLC44A4Q53GD3 710 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 KLHDC7AQ5VTJ3 777 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 FCRL6Q6DN72 434 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 SFRP4Q6FHJ7 346 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-220ENST00000478454 TMEM171Q8WVE6 324 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 GLG1Q92896 1179 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 PBKQ96KB5 322 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 GBA2Q9HCG7 927 aaPredicted RBP4.79□□□□□ -1.64
CCNL1-220ENST00000478454 DNMT3BQ9UBC3 853 aaKnown RBP4.79□□□□□ -1.64
CCNL1-220ENST00000478454 ST3GAL5Q9UNP4 418 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 SNX14Q9Y5W7 946 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 SNX13Q9Y5W8 968 aa4.79□□□□□ -1.64
CCNL1-220ENST00000478454 ZAR1LA6NP61 321 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 CAND2O75155 1236 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 RASSF9O75901 435 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 MT-ND5P03915 603 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 IL6RP08887 468 aaPredicted RBP4.78□□□□□ -1.64
CCNL1-220ENST00000478454 TXNP10599 105 aaKnown RBP4.78□□□□□ -1.64
CCNL1-220ENST00000478454 ATXN1P54253 815 aaKnown RBP4.78□□□□□ -1.64
CCNL1-220ENST00000478454 HLTFQ14527 1009 aaKnown RBP eCLIP4.78□□□□□ -1.64
CCNL1-220ENST00000478454 TREML2Q5T2D2 321 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 DEPDC1Q5TB30 811 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 IL31Q6EBC2 164 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 LIX1LQ8IVB5 337 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 SLC15A3Q8IY34 581 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 RNF152Q8N8N0 203 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 PARD3BQ8TEW8 1205 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 SNX22Q96L94 193 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 STRBPQ96SI9 672 aaKnown RBP4.78□□□□□ -1.64
CCNL1-220ENST00000478454 UNKQ9C0B0 810 aaKnown RBP4.78□□□□□ -1.64
CCNL1-220ENST00000478454 GJB4Q9NTQ9 266 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 MID2Q9UJV3 735 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 CDY1Q9Y6F8 540 aa4.78□□□□□ -1.64
CCNL1-220ENST00000478454 A0A087WZ62 844 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 A1L4Q6 167 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 RAB27BO00194 218 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 RRP9O43818 475 aaKnown RBP4.77□□□□□ -1.65
CCNL1-220ENST00000478454 C1QL1O75973 258 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 IL18RAPO95256 599 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 KRT18P05783 430 aaKnown RBP4.77□□□□□ -1.65
CCNL1-220ENST00000478454 FESP07332 822 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 HMGB1P09429 215 aaKnown RBP4.77□□□□□ -1.65
CCNL1-220ENST00000478454 PHKG2P15735 406 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 TSHRP16473 764 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 ZFXP17010 805 aaPredicted RBP4.77□□□□□ -1.65
CCNL1-220ENST00000478454 RPL17P18621 184 aaKnown RBP4.77□□□□□ -1.65
CCNL1-220ENST00000478454 BTF3P20290 206 aaKnown RBP4.77□□□□□ -1.65
CCNL1-220ENST00000478454 BMP5P22003 454 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 ITPKBP27987 946 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 PTDSS1P48651 473 aaKnown RBP4.77□□□□□ -1.65
CCNL1-220ENST00000478454 NEK3P51956 506 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 ITGA8P53708 1063 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 DAG1Q14118 895 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 CCDC181Q5TID7 509 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 ABRAQ8N0Z2 381 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 FAM98AQ8NCA5 519 aaKnown RBP4.77□□□□□ -1.65
CCNL1-220ENST00000478454 DNAJB14Q8TBM8 379 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 SLC9A6Q92581 669 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 PPP1R9BQ96SB3 815 aa4.77□□□□□ -1.65
CCNL1-220ENST00000478454 ALG8Q9BVK2 526 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms