RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ABHD17BQ5VST6 288 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 SFRP4Q6FHJ7 346 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-211ENST00000476215 RNF44Q7L0R7 432 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 MORC1Q86VD1 984 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 YAF2Q8IY57 180 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 LCORLQ8N3X6 602 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 OR2C3Q8N628 320 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 SAMD3Q8N6K7 520 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 ATP11CQ8NB49 1132 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 B3GALNT2Q8NCR0 500 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 ACRBPQ8NEB7 543 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 IPCEF1Q8WWN9 437 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-211ENST00000476215 FAM136AQ96C01 138 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 Q96MF0 132 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 NELL2Q99435 816 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 TBC1D23Q9NUY8 699 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 ZNF212Q9UDV6 495 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 MID2Q9UJV3 735 aa5.99□□□□□ -1.45
PTCD3-211ENST00000476215 LOC102723971A0A1B0GUV8 181 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 H7C4K7 107 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 SRGNP10124 158 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 PPIFP30405 207 aaKnown RBP5.98□□□□□ -1.45
PTCD3-211ENST00000476215 PRKAG1P54619 331 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 MYO1EQ12965 1108 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 OS9Q13438 667 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-211ENST00000476215 E2F2Q14209 437 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 SLC29A2Q14542 456 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 INSCQ1MX18 579 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 ZIK1Q3SY52 487 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-211ENST00000476215 ICE2Q659A1 982 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 RGS7BPQ6MZT1 257 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-211ENST00000476215 TSHZ1Q6ZSZ6 1077 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 PRIMA1Q86XR5 153 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 SDR16C5Q8N3Y7 309 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 RNF152Q8N8N0 203 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 BEND2Q8NDZ0 799 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 TOR1AIP2Q8NFQ8 470 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 BPIFB1Q8TDL5 484 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 LPIN2Q92539 896 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 SLC39A13Q96H72 371 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 ACTRT3Q9BYD9 372 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 AMBRA1Q9C0C7 1298 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 XPNPEP3Q9NQH7 507 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 SERTAD3Q9UJW9 196 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 NDRG4Q9ULP0 352 aaKnown RBP5.98□□□□□ -1.45
PTCD3-211ENST00000476215 PADI4Q9UM07 663 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 DMTF1Q9Y222 760 aa5.98□□□□□ -1.45
PTCD3-211ENST00000476215 TYRP1P17643 537 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 ACVR2AP27037 513 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 IL1R2P27930 398 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 SERPINB3P29508 390 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 HNRNPMP52272 730 aaKnown RBP eCLIP5.97□□□□□ -1.45
PTCD3-211ENST00000476215 DGKEP52429 567 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 NANOS3P60323 173 aaKnown RBP5.97□□□□□ -1.45
PTCD3-211ENST00000476215 BIRC2Q13490 618 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 PMS2P11Q13670 270 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 ARHGEF7Q14155 803 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 CACHD1Q5VU97 1274 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 RRAGBQ5VZM2 374 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 HIBCHQ6NVY1 386 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-211ENST00000476215 XRRA1Q6P2D8 792 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 LNX2Q8N448 690 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 PPP2R3CQ969Q6 453 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 ZC3H10Q96K80 434 aaKnown RBP5.97□□□□□ -1.45
PTCD3-211ENST00000476215 SGCZQ96LD1 299 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 RPS6KC1Q96S38 1066 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 AIFM2Q9BRQ8 373 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 COLEC11Q9BWP8 271 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 CXorf36Q9H7Y0 433 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 CERS4Q9HA82 394 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 CYP4F11Q9HBI6 524 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 GJB4Q9NTQ9 266 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 KCTD5Q9NXV2 234 aa5.97□□□□□ -1.45
PTCD3-211ENST00000476215 EPN1Q9Y6I3 576 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-211ENST00000476215 A0A1W2PPC4 97 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 CCP110O43303 1012 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 INMTO95050 263 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 RASAL1O95294 804 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 FGFR2P21802 821 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 KCNA3P22001 575 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 PTDSS1P48651 473 aaKnown RBP5.96□□□□□ -1.46
PTCD3-211ENST00000476215 ITGA8P53708 1063 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 ITIH3Q06033 890 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 ARL13BQ3SXY8 428 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 IZUMO3Q5VZ72 239 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 VWA1Q6PCB0 445 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 KCTD20Q7Z5Y7 419 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 SKAP1Q86WV1 359 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 ZNF575Q86XF7 245 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 SLC15A3Q8IY34 581 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 FAM109AQ8N4B1 249 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 SLC44A3Q8N4M1 653 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 DEPTORQ8TB45 409 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 MYCBPAPQ8TBZ2 947 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 SMCR8Q8TEV9 937 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-211ENST00000476215 LRRC46Q96FV0 321 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 SYNPO2LQ9H987 977 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 ALG13Q9NP73 1137 aaKnown RBP5.96□□□□□ -1.46
PTCD3-211ENST00000476215 SSX2IPQ9Y2D8 614 aa5.96□□□□□ -1.46
PTCD3-211ENST00000476215 DAAM1Q9Y4D1 1078 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms