RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TMEM151BQ8IW70 566 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 YAF2Q8IY57 180 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 Q8N3U1 123 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 SLC15A4Q8N697 577 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 TSPYL6Q8N831 410 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 TP53I13Q8NBR0 393 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-207ENST00000476169 CEP70Q8NHQ1 597 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 OTUD7AQ8TE49 926 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-207ENST00000476169 THAP4Q8WY91 577 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 ST8SIA4Q92187 359 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 TFAP2CQ92754 450 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 GOLGA1Q92805 767 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 NELL1Q92832 810 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 SCAMP4Q969E2 229 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 NEIL1Q96FI4 390 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-207ENST00000476169 BORCS6Q96GS4 357 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 C7orf26Q96N11 449 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 SLC38A3Q99624 504 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 DPYSL5Q9BPU6 564 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 GPR63Q9BZJ6 419 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 PAIP1Q9H074 479 aaKnown RBP4.72□□□□□ -1.65
VPS13D-207ENST00000476169 CHST8Q9H2A9 424 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 GSTO2Q9H4Y5 243 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 AGO3Q9H9G7 860 aaKnown RBP4.72□□□□□ -1.65
VPS13D-207ENST00000476169 GPR35Q9HC97 309 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 HEYLQ9NQ87 328 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-207ENST00000476169 A1CFQ9NQ94 594 aaKnown RBP4.72□□□□□ -1.65
VPS13D-207ENST00000476169 FBXO34Q9NWN3 711 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 OAZ3Q9UMX2 235 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 PLEKHM1Q9Y4G2 1056 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 PNPLA7Q6ZV29 1317 aa4.72□□□□□ -1.65
VPS13D-207ENST00000476169 A0A087WWL8 130 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 CDHR4A6H8M9 788 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 PABPN1LA6NDY0 278 aaKnown RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 MBD3L4A6NDZ8 208 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 MBD3L3A6NE82 208 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 TBKBP1A7MCY6 615 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 PRR5-ARHGAP8B1AHC4 643 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 TMEM233B4DJY2 109 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 F5H0A9 414 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 M0QYG6 137 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 P4HA2O15460 535 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 B4GALT3O60512 393 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 CDC14BO60729 498 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 USO1O60763 962 aaKnown RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 AGFG2O95081 481 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 CST5P28325 142 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 GABRB3P28472 473 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 GALNSP34059 522 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 STAT1P42224 750 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 SLC11A2P49281 568 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 SLURP1P55000 103 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 UCP3P55916 312 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 ACTR2P61160 394 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 AP2B1P63010 937 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 VAMP2P63027 116 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 UBXN2BQ14CS0 331 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 KCNA10Q16322 511 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 TSTQ16762 297 aaKnown RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 CRB2Q5IJ48 1285 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 DCAF12L1Q5VU92 463 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 B4GALNT4Q76KP1 1039 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 RRAGAQ7L523 313 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 DOK3Q7L591 496 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 PLEKHH3Q7Z736 793 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 USP37Q86T82 979 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 HERC6Q8IVU3 1022 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 GPR135Q8IZ08 494 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 RNF169Q8NCN4 708 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 OR56A3Q8NH54 315 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 ZFP28Q8NHY6 868 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 TBC1D15Q8TC07 691 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 CSGALNACT1Q8TDX6 532 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 RFFLQ8WZ73 363 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 EID2BQ96D98 161 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 ZNF512Q96ME7 567 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 ZMAT2Q96NC0 199 aaKnown RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 TRAPPC9Q96Q05 1148 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 TREX2Q9BQ50 279 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 TINAGL1Q9GZM7 467 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 SIK2Q9H0K1 926 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 NELFAQ9H3P2 528 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 SPON1Q9HCB6 807 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 NFKBIL1Q9UBC1 381 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 MID2Q9UJV3 735 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 VPS28Q9UK41 221 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 FRMD4BQ9Y2L6 1034 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 MTO1Q9Y2Z2 717 aaKnown RBP4.71□□□□□ -1.66
VPS13D-207ENST00000476169 HS3ST4Q9Y661 456 aa4.71□□□□□ -1.66
VPS13D-207ENST00000476169 PI4KAP2A4QPH2 592 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 NPIPB6E9PJ23 425 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 RAB27BO00194 218 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 KRT38O76015 456 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 INMTO95050 263 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 TSPAN15O95858 294 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 CHEK2O96017 543 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 DNTTP04053 509 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 PIM1P11309 404 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-207ENST00000476169 IL1R1P14778 569 aa4.7□□□□□ -1.66
VPS13D-207ENST00000476169 NPPBP16860 134 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms