RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 NECAB3Q96P71 396 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-227ENST00000475832 HNRNPABQ99729 332 aaKnown RBP12.92□□□□□ -0.34
MRPL55-227ENST00000475832 ZSWIM1Q9BR11 485 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 PAAF1Q9BRP4 392 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
MRPL55-227ENST00000475832 NRDE2Q9H7Z3 1164 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 OSGEPQ9NPF4 335 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 CACNG4Q9UBN1 327 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 SALL4Q9UJQ4 1053 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 CDC23Q9UJX2 597 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 ADAM28Q9UKQ2 775 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 SLC4A7Q9Y6M7 1214 aa12.92□□□□□ -0.34
MRPL55-227ENST00000475832 SF3B1O75533 1304 aaKnown RBP eCLIP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 MUC6Q6W4X9 2439 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 FAM170AA1A519 330 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 TMEM110-MUSTN1A8MSY1 372 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 MIF4GDA9UHW6 222 aaKnown RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 ENC1O14682 589 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 NRP1O14786 923 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 ATMINO43313 823 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 SPOPO43791 374 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 BUB1BO60566 1050 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 FTCDO95954 541 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 ATP1A1P05023 1023 aaKnown RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 FAM200BP0CF97 657 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 ATP2A2P16615 1042 aaKnown RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 DNAJB2P25686 324 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 PAFAH1B1P43034 410 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 TUBB4BP68371 445 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 MESDQ14696 234 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 CLUL1Q15846 466 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 MDH1BQ5I0G3 518 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 MEI1Q5TIA1 1274 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 CCDC181Q5TID7 509 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 PLEKHA7Q6IQ23 1121 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 C4orf50Q6ZRC1 276 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 SLFN11Q7Z7L1 901 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 ZDHHC17Q8IUH5 632 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 DCP1BQ8IZD4 617 aaKnown RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 WDTC1Q8N5D0 677 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 C3orf20Q8ND61 904 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 FEZF2Q8TBJ5 459 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 MYCBPAPQ8TBZ2 947 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 SLC2A14Q8TDB8 520 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 PBX4Q9BYU1 374 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 DPEP3Q9H4B8 488 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 L2HGDHQ9H9P8 463 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 RNF14Q9UBS8 474 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 ANAPC7Q9UJX3 599 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 SNX12Q9UMY4 172 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 TIMM13Q9Y5L4 95 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 TRANK1O15050 2925 aa12.91□□□□□ -0.34
MRPL55-227ENST00000475832 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
MRPL55-227ENST00000475832 ZBBXA8MT70 800 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 H7C4K7 107 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 I3L4J1 428 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 DGKIO75912 1065 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 SLU7O95391 586 aaKnown RBP12.9□□□□□ -0.34
MRPL55-227ENST00000475832 KRT3P12035 628 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 CCDC130P13994 396 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 ACAT1P24752 427 aaKnown RBP12.9□□□□□ -0.34
MRPL55-227ENST00000475832 GABRB2P47870 512 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 GSCP56915 257 aaPredicted RBP12.9□□□□□ -0.34
MRPL55-227ENST00000475832 WDR5P61964 334 aaKnown RBP12.9□□□□□ -0.34
MRPL55-227ENST00000475832 PLCB3Q01970 1234 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 MAMLD1Q13495 774 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 INTS6LQ5JSJ4 861 aaKnown RBP12.9□□□□□ -0.34
MRPL55-227ENST00000475832 LRRC57Q8N9N7 239 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 TIFAQ96CG3 184 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 PBKQ96KB5 322 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 HSFY1Q96LI6 401 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 PLVAPQ9BX97 442 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 DUSP16Q9BY84 665 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 DNAJB4Q9UDY4 337 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 COG5Q9UP83 839 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.9□□□□□ -0.34
MRPL55-227ENST00000475832 MRFAP1Q9Y605 127 aa12.9□□□□□ -0.34
MRPL55-227ENST00000475832 OR6C75A6NL08 312 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 GOLGA8SH3BPF8 625 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 RIOK3O14730 519 aaKnown RBP12.89□□□□□ -0.35
MRPL55-227ENST00000475832 XPO1O14980 1071 aaKnown RBP12.89□□□□□ -0.35
MRPL55-227ENST00000475832 NPR3P17342 541 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 LAG3P18627 525 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 PBX2P40425 430 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 SLC11A1P49279 550 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 GATMP50440 423 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 TERF1P54274 439 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 PDE4CQ08493 712 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 PTP4A2Q12974 167 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 BTG3Q14201 252 aaPredicted RBP12.89□□□□□ -0.35
MRPL55-227ENST00000475832 RAB30Q15771 203 aa12.89□□□□□ -0.35
MRPL55-227ENST00000475832 NFE2Q16621 373 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 240.5 ms