RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 DDX3XO00571 662 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 C2CD2LO14523 706 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 ARHGAP6O43182 974 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 MED7O43513 233 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 AKR1B10O60218 316 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 TBC1D4O60343 1298 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 MICAL2O94851 1124 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 RB1P06400 928 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 FAM228BP0C875 321 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 CCDC130P13994 396 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 ANXA13P27216 316 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 CYLC1P35663 651 aaPredicted RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 RPIAP49247 311 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 GLUD2P49448 558 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 KIF11P52732 1056 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 ERVK-21P61565 698 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 TSPY1Q01534 308 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 DSG1Q02413 1049 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 BMS1Q14692 1282 aaKnown RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 STILQ15468 1287 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 RAB30Q15771 203 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 CNGA2Q16280 664 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 PSMD5Q16401 504 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 MDH1BQ5I0G3 518 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 INTS6LQ5JSJ4 861 aaKnown RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 PPP1R26Q5T8A7 1209 aaPredicted RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 FAM171BQ6P995 826 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 RSPO2Q6UXX9 243 aaPredicted RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 LRRTM3Q86VH5 581 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 VPS36Q86VN1 386 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 GLYCTKQ8IVS8 523 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 CCDC170Q8IYT3 715 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 SLC30A5Q8TAD4 765 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 MYCBPAPQ8TBZ2 947 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 SPPL3Q8TCT6 385 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 TSC1Q92574 1164 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 CYFIP2Q96F07 1278 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 TGS1Q96RS0 853 aaKnown RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 PCDHB18PQ96TA0 734 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 PKMYT1Q99640 499 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 B3GNT5Q9BYG0 378 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 ZCWPW1Q9H0M4 648 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 PDCL3Q9H2J4 239 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 ALG13Q9NP73 1137 aaKnown RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 SEPT11Q9NVA2 429 aaKnown RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 TMLHEQ9NVH6 421 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 MTRRQ9UBK8 725 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 STK39Q9UEW8 545 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 ADAMTS1Q9UHI8 967 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 GTF3C4Q9UKN8 822 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 LZTS1Q9Y250 596 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 EPN1Q9Y6I3 576 aaPredicted RBP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDX39B-217ENST00000474961 ATG2AQ2TAZ0 1938 aa10.09□□□□□ -0.79
DDX39B-217ENST00000474961 MTCL1Q9Y4B5 1905 aaKnown RBP10.08□□□□□ -0.8
DDX39B-217ENST00000474961 NDUFA10O95299 355 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 URODP06132 367 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 OR4Q2P0C623 313 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 CTSAP10619 480 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 ADORA2BP29275 332 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 CDR1P51861 262 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 GFPT1Q06210 699 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-217ENST00000474961 SLC18A3Q16572 532 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 GOLGA7BQ2TAP0 167 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 HS1BP3Q53T59 392 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 DENND1BQ6P3S1 775 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 LCLAT1Q6UWP7 414 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 TRIM72Q6ZMU5 477 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 PAQR9Q6ZVX9 377 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 PALB2Q86YC2 1186 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 PASD1Q8IV76 773 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 GPR65Q8IYL9 337 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 DCP1BQ8IZD4 617 aaKnown RBP10.08□□□□□ -0.8
DDX39B-217ENST00000474961 FUKQ8N0W3 1084 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 SLC2A14Q8TDB8 520 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 AUTS2Q8WXX7 1259 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 TRIM44Q96DX7 344 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-217ENST00000474961 PCED1BQ96HM7 432 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 HNRNPABQ99729 332 aaKnown RBP10.08□□□□□ -0.8
DDX39B-217ENST00000474961 MED10Q9BTT4 135 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 OXCT2Q9BYC2 517 aaPredicted RBP10.08□□□□□ -0.8
DDX39B-217ENST00000474961 ZBP1Q9H171 429 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 SPTLC3Q9NUV7 552 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 TSPAN16Q9UKR8 245 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 BACE2Q9Y5Z0 518 aa10.08□□□□□ -0.8
DDX39B-217ENST00000474961 PLXNA3P51805 1871 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 EIF3CLB5ME19 914 aaKnown RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 M0QYV0 167 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CLDN5O00501 218 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 ZNF263O14978 683 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 ADAM12O43184 909 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CXCL14O95715 111 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CYP1A1P04798 512 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 RPL17P18621 184 aaKnown RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 DNAJB1P25685 340 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 ARPP19P56211 112 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms