RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 EXOC2Q96KP1 924 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 USP28Q96RU2 1077 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 LLPHQ9BRT6 129 aaKnown RBP2.78□□□□□ -1.96
VPS45-206ENST00000472756 FUCA2Q9BTY2 467 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 MYL10Q9BUA6 226 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 RTFDC1Q9BY42 306 aaPredicted RBP2.78□□□□□ -1.96
VPS45-206ENST00000472756 CELF4Q9BZC1 486 aaKnown RBP2.78□□□□□ -1.96
VPS45-206ENST00000472756 OSBPL2Q9H1P3 480 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 EPC1Q9H2F5 836 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 ACSS2Q9NR19 701 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 IL17RBQ9NRM6 502 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 AATFQ9NY61 560 aaKnown RBP eCLIP2.78□□□□□ -1.96
VPS45-206ENST00000472756 RAI14Q9P0K7 980 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 CTNNA3Q9UI47 895 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 SYNPO2Q9UMS6 1093 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 LRP12Q9Y561 859 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.78□□□□□ -1.96
VPS45-206ENST00000472756 SLC4A4Q9Y6R1 1079 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 CASZ1Q86V15 1759 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 EP400Q96L91 3159 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 KAT6AQ92794 2004 aa2.78□□□□□ -1.96
VPS45-206ENST00000472756 ANKRD31Q8N7Z5 1873 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 LAMA4Q16363 1823 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 NID2Q14112 1375 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 LTBP1Q14766 1721 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 NRXN2Q9P2S2 1712 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 GAKO14976 1311 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 A0A087WWV3 80 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 GPR75-ASB3A0A0A6YYF3 556 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 A0A0A6YYJ9 748 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 SYCE3A1L190 88 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 VPS37CA5D8V6 355 aaPredicted RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 CYSRT1A8MQ03 144 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 TP73O15350 636 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 FIBPO43427 364 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 ORC4O43929 436 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 PRDM1O75626 825 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 BBOX1O75936 387 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 UFL1O94874 794 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 PLEKHA8P1O95397 391 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 NPTXRO95502 500 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 HMGB1P09429 215 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 CBSLP0DN79 551 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 GAAP10253 952 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 HSP90B1P14625 803 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 MCM5P33992 734 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 CBSP35520 551 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 LIFRP42702 1097 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 PLCD1P51178 756 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 RNASE9P60153 205 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 IRF9Q00978 393 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 SLC6A3Q01959 620 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 KIF23Q02241 960 aaPredicted RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 NPY5RQ15761 445 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 SHROOM1Q2M3G4 852 aaPredicted RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 SBK1Q52WX2 424 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 CAVIN4Q5BKX8 364 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 TRIM61Q5EBN2 209 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 EARS2Q5JPH6 523 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 FAM102AQ5T9C2 384 aaPredicted RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 C12orf60Q5U649 245 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 FOXB2Q5VYV0 432 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 NAA16Q6N069 864 aaPredicted RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 APOA5Q6Q788 366 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 ZNF517Q6ZMY9 492 aaPredicted RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 RASGRP2Q7LDG7 609 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 KANSL1Q7Z3B3 1105 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 ENAHQ8N8S7 591 aaPredicted RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 SLC44A5Q8NCS7 719 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 ENGASEQ8NFI3 743 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 LEO1Q8WVC0 666 aaPredicted RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 UBXN4Q92575 508 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 MRFAP1L1Q96HT8 127 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 RBM17Q96I25 401 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 DNAJC7Q99615 494 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 MRPL4Q9BYD3 311 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.77□□□□□ -1.97
VPS45-206ENST00000472756 NAPBQ9H115 298 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 KLK15Q9H2R5 256 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 GOLPH3LQ9H4A5 285 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 GRPEL1Q9HAV7 217 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 DDX4Q9NQI0 724 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 GNL3LQ9NVN8 582 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 ING3Q9NXR8 418 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 DNAI1Q9UI46 699 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 RCOR1Q9UKL0 485 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 ATP6V0A2Q9Y487 856 aa2.77□□□□□ -1.97
VPS45-206ENST00000472756 DDX49Q9Y6V7 483 aaKnown RBP2.77□□□□□ -1.97
VPS45-206ENST00000472756 TIAM2Q8IVF5 1701 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 COL4A5P29400 1685 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 CHD4Q14839 1912 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 IGKV6D-41A0A0C4DH26 115 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 hCG_1642624A0A1W2PR95 340 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 UBA6A0AVT1 1052 aaPredicted RBP2.76□□□□□ -1.97
VPS45-206ENST00000472756 FAM221BA6H8Z2 402 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 GOLGA6L3A6NEY3 463 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 YDJCA8MPS7 323 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 IFIT3O14879 490 aaKnown RBP2.76□□□□□ -1.97
VPS45-206ENST00000472756 MAFGO15525 162 aa2.76□□□□□ -1.97
VPS45-206ENST00000472756 CYTH3O43739 400 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms