RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 BAHD1Q8TBE0 780 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-209ENST00000472116 C2orf15Q8WU43 125 aaKnown RBP11.1□□□□□ -0.63
CDHR3-209ENST00000472116 YTHDC1Q96MU7 727 aaKnown RBP11.1□□□□□ -0.63
CDHR3-209ENST00000472116 CDT1Q9H211 546 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 CYP8B1Q9UNU6 501 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 PCDHGB2Q9Y5G2 931 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 HEMK1Q9Y5R4 338 aaPredicted RBP11.1□□□□□ -0.63
CDHR3-209ENST00000472116 MGAQ8IWI9 3026 aa11.1□□□□□ -0.63
CDHR3-209ENST00000472116 TEP1Q99973 2627 aaKnown RBP11.09□□□□□ -0.63
CDHR3-209ENST00000472116 MYH11P35749 1972 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 TP53BP1Q12888 1972 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-209ENST00000472116 NID2Q14112 1375 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 IGHV1OR15-9A0A0B4J2B8 117 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.09□□□□□ -0.63
CDHR3-209ENST00000472116 K7ERI5 159 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 XPOTO43592 962 aaKnown RBP11.09□□□□□ -0.63
CDHR3-209ENST00000472116 CILPO75339 1184 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 KAT7O95251 611 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 F11P03951 625 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 EDN1P05305 212 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 CSH1P0DML2 217 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 CSH2P0DML3 217 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 ODC1P11926 461 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 TYMPP19971 482 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 ACTN2P35609 894 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 EXOSC10Q01780 885 aaKnown RBP11.09□□□□□ -0.63
CDHR3-209ENST00000472116 CCDC173Q0VFZ6 552 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 SMARCB1Q12824 385 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 USP4Q13107 963 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 NECTIN1Q15223 517 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 INAVAQ3KP66 663 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 NT5DC1Q5TFE4 455 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 RIN3Q8TB24 985 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 SPPL2BQ8TCT7 592 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 HAS1Q92839 578 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 FGF11Q92914 225 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 LGMNQ99538 433 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 MIR1-1HGQ9H1L0 117 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 PCDHA12Q9UN75 941 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDHR3-209ENST00000472116 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
CDHR3-209ENST00000472116 HMGB1P09429 215 aaKnown RBP11.08□□□□□ -0.64
CDHR3-209ENST00000472116 MCF2P10911 925 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 HARSP12081 509 aaKnown RBP11.08□□□□□ -0.64
CDHR3-209ENST00000472116 HOXB2P14652 356 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 GABRG2P18507 467 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 PDE6CP51160 858 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 UCNP55089 124 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 TMPRSS3P57727 454 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 RESTQ13127 1097 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 LY6DQ14210 128 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 KCNB1Q14721 858 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 COLEC12Q5KU26 742 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 SDE2Q6IQ49 451 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 ZCCHC9Q8N567 271 aaKnown RBP11.08□□□□□ -0.64
CDHR3-209ENST00000472116 FSIP1Q8NA03 581 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 SH3RF2Q8TEC5 729 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 BSNDQ8WZ55 320 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 TMEM176AQ96HP8 235 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 ZNF419Q96HQ0 510 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-209ENST00000472116 HSD17B14Q9BPX1 270 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 MRPL4Q9BYD3 311 aaKnown RBP11.08□□□□□ -0.64
CDHR3-209ENST00000472116 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 LSG1Q9H089 658 aaKnown RBP11.08□□□□□ -0.64
CDHR3-209ENST00000472116 ANO2Q9NQ90 1003 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 ARHGEF4Q9NR80 690 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 TUBGCP4Q9UGJ1 667 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 IL17BQ9UHF5 180 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 PHLPP2Q6ZVD8 1323 aa11.08□□□□□ -0.64
CDHR3-209ENST00000472116 TEX15Q9BXT5 2789 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 ARHGEF35A5YM69 484 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 HAPLN1P10915 354 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-209ENST00000472116 CDK4P11802 303 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 IFNAR1P17181 557 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 MAOBP27338 520 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 EIF2DP41214 584 aaKnown RBP11.07□□□□□ -0.64
CDHR3-209ENST00000472116 GRIA2P42262 883 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 GRK6P43250 576 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 TNFRSF4P43489 277 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 TLE3Q04726 772 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 KCNH2Q12809 1159 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 AAMPQ13685 434 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 KRT32Q14532 448 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 HLA-BQ31612 363 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 EMC10Q5UCC4 262 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 TMEM150AQ86TG1 271 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 METTL23Q86XA0 190 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 SPACA3Q8IXA5 215 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 FAM177A1Q8N128 213 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-209ENST00000472116 THEM5Q8N1Q8 247 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 SPIRE2Q8WWL2 714 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 MED8Q96G25 268 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 KIFC3Q9BVG8 833 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 NRSN2Q9GZP1 204 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 LINC00597Q9H2U6 94 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 IL21RQ9HBE5 538 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 ZDHHC4Q9NPG8 344 aa11.07□□□□□ -0.64
CDHR3-209ENST00000472116 ABI2Q9NYB9 513 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-209ENST00000472116 FTSJ1Q9UET6 329 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms