RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 CDKN2BP42772 138 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ITGA8P53708 1063 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 MAGOHP61326 146 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 LACTBP83111 547 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 CAV1Q03135 178 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 PTPN11Q06124 597 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 CALCOCO2Q13137 446 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 IRF5Q13568 498 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 BYSLQ13895 437 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 OASLQ15646 514 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 GRIK4Q16099 956 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CCDC142Q17RM4 750 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 FAM110CQ1W6H9 321 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 WDR72Q3MJ13 1102 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CYP4A22Q5TCH4 519 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 HIBCHQ6NVY1 386 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 SPOCD1Q6ZMY3 1216 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 POLNQ7Z5Q5 900 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ZNF410Q86VK4 478 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ERICH1Q86X53 443 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 XYLT1Q86Y38 959 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 NT5DC4Q86YG4 428 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CCDC50Q8IVM0 306 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 KIAA0319LQ8IZA0 1049 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 JOSD2Q8TAC2 188 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 NPLOC4Q8TAT6 608 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 RAPGEF5Q92565 580 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CENPTQ96BT3 561 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 MCRS1Q96EZ8 462 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ZNF333Q96JL9 665 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CPXM1Q96SM3 734 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 PTPN18Q99952 460 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 TRAIPQ9BWF2 469 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ADAMTS10Q9H324 1103 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 TUT1Q9H6E5 874 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 KLHL11Q9NVR0 708 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 DDX56Q9NY93 547 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 NXF1Q9UBU9 619 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 ASIC3Q9UHC3 531 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 FEZ2Q9UHY8 353 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 ITGA11Q9UKX5 1188 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.76□□□□□ -1.33
SPEN-204ENST00000471538 AKT3Q9Y243 479 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 EFR3BQ9Y2G0 817 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 RRP15Q9Y3B9 282 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 CEP83Q9Y592 693 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ATXN2Q99700 1313 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 C5orf60A6NFR6 353 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 PI4K2BG5E9Z4 385 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 TRAPPC3O43617 180 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 GPR32O75388 356 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 LRCH4O75427 683 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 TCEA3O75764 348 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 AGTP01019 485 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 HMGCRP04035 888 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 KRT19P08727 400 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 VDRP11473 427 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 KRT10P13645 584 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ATF2P15336 505 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 IL1R2P27930 398 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 TMOD1P28289 359 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 POLR2BP30876 1174 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 HOXA11P31270 313 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 HPDP32754 393 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 RFC1P35251 1148 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 GPD2P43304 727 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 MMP13P45452 471 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CCT5P48643 541 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 IFFO1Q0D2I5 559 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ORC1Q13415 861 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ACVR2BQ13705 512 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 AUHQ13825 339 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 ZNF268Q14587 947 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 TMEM132DQ14C87 1099 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CNGA2Q16280 664 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 TMEM132AQ24JP5 1023 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 TFDP3Q5H9I0 405 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 C6orf118Q5T5N4 469 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 IQSEC1Q6DN90 963 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 DCUN1D2Q6PH85 259 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 PLEKHH3Q7Z736 793 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CROCCP2Q86T23 111 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 NLRP14Q86W24 1093 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ALLCQ8N6M5 410 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CCDC89Q8N998 374 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 BBOF1Q8ND07 529 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 OR6J1Q8NGC5 347 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 MYCBPAPQ8TBZ2 947 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 EPS8L3Q8TE67 593 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 NKD2Q969F2 451 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 TMEM176AQ96HP8 235 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 PPP1R16BQ96T49 567 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 FAM118BQ9BPY3 351 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 TINF2Q9BSI4 451 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 DDX23Q9BUQ8 820 aaKnown RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 TMUB1Q9BVT8 246 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 ROPN1BQ9BZX4 212 aaPredicted RBP6.76□□□□□ -1.33
SPEN-204ENST00000471538 TSPYL1Q9H0U9 437 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 PRO3102Q9H379 93 aa6.76□□□□□ -1.33
SPEN-204ENST00000471538 CENPHQ9H3R5 247 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms