RNA–Protein interactions for RNA: ENST00000470819.2

CDKN2A-204, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-204ENST00000470819 PATJQ8NI35 1801 aa15.21■□□□□ 0.03
CDKN2A-204ENST00000470819 UBE4BO95155 1302 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 C2orf78A6NCI8 922 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 K7ESF4 209 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 HRO43593 1189 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 GRIK1P39086 918 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 CYP27A1Q02318 531 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 ZNF268Q14587 947 aaPredicted RBP15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 KNOP1Q1ED39 458 aaKnown RBP15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 BMT2Q1RMZ1 405 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 WDR72Q3MJ13 1102 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 HEATR6Q6AI08 1181 aaKnown RBP15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 FSTL4Q6MZW2 842 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 SYNPOQ8N3V7 929 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 ARL14EPQ8N8R7 260 aaPredicted RBP15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 SECISBP2LQ93073 1101 aaKnown RBP15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 PCED1BQ96HM7 432 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 SNX25Q9H3E2 840 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 CFAP45Q9UL16 551 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 VPS13AQ96RL7 3174 aa15.2■□□□□ 0.02
CDKN2A-204ENST00000470819 TRAV19A0A0A6YYK7 116 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 EXOC3O60645 756 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 PAPSS2O95340 614 aaPredicted RBP15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 USP17L7P0C7H9 530 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 CASP4P49662 377 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 MYL6P60660 151 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 USP46P62068 366 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 STK4Q13043 487 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 SRSF5Q13243 272 aaKnown RBP15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 MAPRE1Q15691 268 aaKnown RBP15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 TMEM196Q5HYL7 178 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 PKN3Q6P5Z2 889 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 VSTM1Q6UX27 236 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 PRR23BQ6ZRT6 265 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 C12orf56Q8IXR9 622 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 CEP57L1Q8IYX8 460 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 OR6B3Q8NGW1 331 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 PLEKHO2Q8TD55 490 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 PAGE5Q96GU1 130 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 SPATA17Q96L03 361 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 FBRSL1Q9HCM7 1045 aaKnown RBP15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 GCNT4Q9P109 453 aa15.19■□□□□ 0.02
CDKN2A-204ENST00000470819 OTOGLQ3ZCN5 2332 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 FANCMQ8IYD8 2048 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 TRDMT1O14717 391 aaKnown RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 ACTN4O43707 911 aaKnown RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 KLRC4O43908 158 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 TACC1O75410 805 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 CKMP06732 381 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 SLFN14P0C7P3 912 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 PTPN1P18031 435 aaKnown RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 HDCP19113 662 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 TGM1P22735 817 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 GALK1P51570 392 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 TNNC1P63316 161 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 GRSF1Q12849 480 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 TRPC3Q13507 836 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 SIM2Q14190 667 aaPredicted RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 MTF1Q14872 753 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 PDGFRLQ15198 375 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 ZNF77Q15935 545 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 RSPO4Q2I0M5 234 aaPredicted RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 NAIF1Q69YI7 327 aaPredicted RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 DENND5BQ6ZUT9 1274 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 DGLUCYQ7Z3D6 616 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 LONP2Q86WA8 852 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 CHAMP1Q96JM3 812 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 XYLT2Q9H1B5 865 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 LINC00597Q9H2U6 94 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 DPEP3Q9H4B8 488 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 DUS2Q9NX74 493 aaKnown RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 CGNQ9P2M7 1197 aaKnown RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 NXF1Q9UBU9 619 aaKnown RBP15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 GMEB2Q9UKD1 530 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 RAB23Q9ULC3 237 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 WNT6Q9Y6F9 365 aa15.18■□□□□ 0.02
CDKN2A-204ENST00000470819 DMDP11532 3685 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 F8VP50 259 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 PHACTR2O75167 634 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 EGFP01133 1207 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 FAM163BP0C2L3 166 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 ANXA13P27216 316 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 GJA4P35212 333 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 CACNA2D1P54289 1103 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 PUM1Q14671 1186 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 KCNB1Q14721 858 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 KMT5BQ4FZB7 885 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 LAIR1Q6GTX8 287 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 GPR161Q8N6U8 529 aaKnown RBP15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 SH3RF2Q8TEC5 729 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 OSCP1Q8WVF1 389 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 ELMO3Q96BJ8 720 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 ECT2Q9H8V3 914 aa15.17■□□□□ 0.02
CDKN2A-204ENST00000470819 PARD6AQ9NPB6 346 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms