RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 DDX27Q96GQ7 796 aaKnown RBP11.19□□□□□ -0.62
CHD3-208ENST00000470531 AGO4Q9HCK5 861 aaKnown RBP11.19□□□□□ -0.62
CHD3-208ENST00000470531 MAN1C1Q9NR34 630 aa11.19□□□□□ -0.62
CHD3-208ENST00000470531 CISHQ9NSE2 258 aa11.19□□□□□ -0.62
CHD3-208ENST00000470531 FRMPD4Q14CM0 1322 aa11.19□□□□□ -0.62
CHD3-208ENST00000470531 SPECC1L-ADORA2AF8WAN1 911 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 KRT37O76014 449 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 TAC1P20366 129 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 GLRBP48167 497 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 PTDSS1P48651 473 aaKnown RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 WDR4P57081 412 aaKnown RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 ZNF200P98182 395 aaPredicted RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 MGAT5Q09328 741 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 USP33Q8TEY7 942 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 FAM163AQ96GL9 167 aaPredicted RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 WNK4Q96J92 1243 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 COL18A1P39060 1754 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 IGLV3-22A0A075B6J6 115 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 GGPS1O95749 300 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 CCNE2O96020 404 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 NUDT17P0C025 328 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 LINGO3P0C6S8 592 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 GZMAP12544 262 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 GEMIN4P57678 1058 aaKnown RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 FSTL1Q12841 308 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 GRIK3Q13003 919 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 TRIP10Q15642 601 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 GJC2Q5T442 439 aaPredicted RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 NBPF12Q5TAG4 269 aaPredicted RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 TDRD10Q5VZ19 366 aaKnown RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 CRELD2Q6UXH1 353 aaPredicted RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 SPOCD1Q6ZMY3 1216 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 OTOAQ7RTW8 1153 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 CCHCR1Q8TD31 782 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 PRPF31Q8WWY3 499 aaKnown RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 CENPTQ96BT3 561 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 MTBPQ96DY7 904 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 RIT2Q99578 217 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 PDCD2LQ9BRP1 358 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 MED10Q9BTT4 135 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 MOV10L1Q9BXT6 1211 aaKnown RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 RPF1Q9H9Y2 349 aaKnown RBP11.18□□□□□ -0.62
CHD3-208ENST00000470531 NRBP2Q9NSY0 501 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 SNX9Q9Y5X1 595 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 PLCH1Q4KWH8 1693 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 CAPN15O75808 1086 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 ITGB3P05106 788 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 MAMLD1Q13495 774 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 SLC12A1Q13621 1099 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 DUOXA2Q1HG44 320 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 DSTYKQ6XUX3 929 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 SLFN11Q7Z7L1 901 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 BORCS6Q96GS4 357 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 TXLNGYQ9BZA5 131 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 CYP26B1Q9NR63 512 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 UBAP1Q9NZ09 502 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 WHRNQ9P202 907 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 TMX2Q9Y320 296 aa11.18□□□□□ -0.62
CHD3-208ENST00000470531 GOLGA8CPA6NN73 597 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 PIK3CDO00329 1044 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 CES2O00748 559 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 TYK2P29597 1187 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 GMPRP36959 345 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 SCNN1BP51168 640 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 JAK3P52333 1124 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 MRPS9P82933 396 aaKnown RBP11.17□□□□□ -0.62
CHD3-208ENST00000470531 ITKQ08881 620 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 MAP7D1Q3KQU3 841 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 TMEM161BQ8NDZ6 487 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 FAM13CQ8NE31 585 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 SHC3Q92529 594 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 EZH1Q92800 747 aaPredicted RBP11.17□□□□□ -0.62
CHD3-208ENST00000470531 SLC38A10Q9HBR0 1119 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 ZFATQ9P243 1243 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 PCYOX1Q9UHG3 505 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 ZNF142P52746 1687 aaPredicted RBP11.17□□□□□ -0.62
CHD3-208ENST00000470531 ASTN2O75129 1339 aaPredicted RBP11.17□□□□□ -0.62
CHD3-208ENST00000470531 DKC1O60832 514 aaKnown RBP eCLIP11.17□□□□□ -0.621e-26■■■■■ 66.1
CHD3-208ENST00000470531 UNC5CO95185 931 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 VIL1P09327 827 aaKnown RBP11.17□□□□□ -0.62
CHD3-208ENST00000470531 ATP4AP20648 1035 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 CAP2P40123 477 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 GPC3P51654 580 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 POU5F1BQ06416 359 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 BNIP1Q12981 228 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 RASA2Q15283 850 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 UNC45BQ8IWX7 931 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 SCG3Q8WXD2 468 aaKnown RBP11.17□□□□□ -0.62
CHD3-208ENST00000470531 GMCL1Q96IK5 515 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 BATF3Q9NR55 127 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 SLC17A6Q9P2U8 582 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 RBM47A0AV96 593 aaKnown RBP11.17□□□□□ -0.62
CHD3-208ENST00000470531 E9PBE3 544 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 PEX1O43933 1283 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 KLHL41O60662 606 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 DGAT1O75907 488 aa11.17□□□□□ -0.62
CHD3-208ENST00000470531 SEC24DO94855 1032 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms