RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SHOC2Q9UQ13 582 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 B3GNT3Q9Y2A9 372 aa9.43□□□□□ -0.9
SMARCE1-207ENST00000469334 ASTN2O75129 1339 aaPredicted RBP9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 ZNFX1Q9P2E3 1918 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 TNS2Q63HR2 1409 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 FAM237BA0A1B0GVD1 139 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 DCAF8L1A6NGE4 600 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 FAM47E-STBD1D6RA91 191 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 SPTLC1O15269 473 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC37A4O43826 429 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 MGEA5O60502 916 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 LPXNO60711 386 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 KLHL2O95198 593 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 LDHAP00338 332 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 THRAP10827 490 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 ECM1Q16610 540 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 PTF1AQ7RTS3 328 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 MIER3Q7Z3K6 550 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 TICAM1Q8IUC6 712 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 PEX5LQ8IYB4 626 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 TRIML2Q8N7C3 387 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 ETNPPLQ8TBG4 499 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 ATG4AQ8WYN0 398 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 PLEKHA8Q96JA3 519 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 NSMCE3Q96MG7 304 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 INO80BQ9C086 356 aaPredicted RBP9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 GID8Q9NWU2 228 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC17A7Q9P2U7 560 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 BCAP29Q9UHQ4 241 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 DNM3Q9UQ16 869 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 SNX9Q9Y5X1 595 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 MYO3BQ8WXR4 1341 aa9.42□□□□□ -0.9
SMARCE1-207ENST00000469334 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 EIF3FO00303 357 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 MCF2LO15068 1137 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 CYP26A1O43174 497 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 BMP10O95393 424 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 FUCA1P04066 466 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 STT3AP46977 705 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 C21orf59P57076 290 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC18A2Q05940 514 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 ADGRE1Q14246 886 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 METTL21CQ5VZV1 264 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 HM13Q8TCT9 377 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 PPP4R1Q8TF05 950 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 CNBD2Q96M20 576 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 RANBP9Q96S59 729 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 KCNK16Q96T55 309 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 MRPL46Q9H2W6 279 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 IL17RBQ9NRM6 502 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 TRNAU1APQ9NX07 287 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 QPCTLQ9NXS2 382 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 CDH22Q9UJ99 828 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 APPL1Q9UKG1 709 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 NIP7Q9Y221 180 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 SPATA31A5Q5VU36 1347 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 SPATA31A6Q5VVP1 1343 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 SPATA31A7Q8IWB4 1347 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 NUP98P52948 1817 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 IQANK1A0A1B0GTG1 560 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 TMEM114B3SHH9 223 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 K7EPI3 171 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 PFDN6O15212 129 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 EIF3DO15371 548 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 KDM1AO60341 852 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 FAM155BO75949 473 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 CAPNS1P04632 268 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 BGNP21810 368 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 HOXD13P35453 343 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 COPAP53621 1224 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 MYL7Q01449 175 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 WASHC5Q12768 1159 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 KLF1Q13351 362 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 OASLQ15646 514 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 CCDC138Q96M89 665 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 FAM96AQ9H5X1 160 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 TUT1Q9H6E5 874 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 ACSS3Q9H6R3 686 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 POMPQ9Y244 141 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 CARD8Q9Y2G2 431 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 SPO11Q9Y5K1 396 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 SCINQ9Y6U3 715 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 UBE4BO95155 1302 aa9.41□□□□□ -0.9
SMARCE1-207ENST00000469334 COL18A1P39060 1754 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 PRR5-ARHGAP8B1AHC4 643 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 E9PMD0 336 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 TDP2O95551 362 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 MT-ND3P03897 115 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 C6orf222P0C671 652 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 EEF2P13639 858 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 PSMC3P17980 439 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 TKTP29401 623 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 CIITAP33076 1130 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 CASP5P51878 434 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 SLC12A3P55017 1021 aa9.4□□□□□ -0.9
SMARCE1-207ENST00000469334 ESRRGP62508 458 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms