RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 NOLC1Q14978 699 aaKnown RBP eCLIP11.07□□□□□ -0.64
HDAC3-203ENST00000467533 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
HDAC3-203ENST00000467533 SYCP2LQ5T4T6 812 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 EMC10Q5UCC4 262 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 CPLX2Q6PUV4 134 aaKnown RBP11.07□□□□□ -0.64
HDAC3-203ENST00000467533 CATSPER3Q86XQ3 398 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 FAM181AQ8N9Y4 354 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 BAHD1Q8TBE0 780 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-203ENST00000467533 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 BAP1Q92560 729 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 SENP8Q96LD8 212 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 SLC22A12Q96S37 553 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 CYP2S1Q96SQ9 504 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 PNKPQ96T60 521 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 PI4K2AQ9BTU6 479 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 UXTQ9UBK9 157 aaPredicted RBP11.07□□□□□ -0.64
HDAC3-203ENST00000467533 DNMT3LQ9UJW3 386 aa11.07□□□□□ -0.64
HDAC3-203ENST00000467533 UNC79Q9P2D8 2635 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 ABLIM1O14639 778 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 PPEF2O14830 753 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 FLRT2O43155 660 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 TLX3O43711 291 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-203ENST00000467533 NEMFO60524 1076 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 NDUFS2O75306 463 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 DKK1O94907 266 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 CER1O95813 267 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 CYP17A1P05093 508 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 CHRM1P11229 460 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-203ENST00000467533 XBP1P17861 261 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 CYP3A5P20815 502 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 RPS6KB1P23443 525 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 MATR3P43243 847 aaKnown RBP eCLIP11.06□□□□□ -0.64
HDAC3-203ENST00000467533 GPR15P49685 360 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 PEX3P56589 373 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 PPP2R3AQ06190 1150 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 SCRN1Q12765 414 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 GAB4Q2WGN9 574 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 ZC2HC1CQ53FD0 456 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-203ENST00000467533 WDR45BQ5MNZ6 344 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 SDHAF4Q5VUM1 108 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 PCSK4Q6UW60 755 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 METTL23Q86XA0 190 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 ARL14EPQ8N8R7 260 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-203ENST00000467533 RHBDD1Q8TEB9 315 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 ZBTB45Q96K62 511 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-203ENST00000467533 AGXT2Q9BYV1 514 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 TMEM134Q9H6X4 195 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 GAREM1Q9H706 876 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 IL21RQ9HBE5 538 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 ARHGEF4Q9NR80 690 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 TM7SF3Q9NS93 570 aa11.06□□□□□ -0.64
HDAC3-203ENST00000467533 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-203ENST00000467533 A0A1B0GTW7 788 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 MEI4A8MW99 385 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 ERVH48-1M5A8F1 160 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 ZBTB24O43167 697 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-203ENST00000467533 CILPO75339 1184 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 ZNF217O75362 1048 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 PRPF40AO75400 957 aaKnown RBP11.05□□□□□ -0.64
HDAC3-203ENST00000467533 ZNF883P0CG24 379 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 HOXB2P14652 356 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 MAOBP27338 520 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 MATKP42679 507 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 KIR2DL1P43626 348 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-203ENST00000467533 NPTX2P47972 431 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 SLC6A11P48066 632 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 LILRA4P59901 499 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 CXADRP78310 365 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 SEMG2Q02383 582 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 MESP2Q0VG99 397 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 SMARCB1Q12824 385 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 SMAD1Q15797 465 aaKnown RBP11.05□□□□□ -0.64
HDAC3-203ENST00000467533 TAS1R3Q7RTX0 852 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 TRMT11Q7Z4G4 463 aaKnown RBP11.05□□□□□ -0.64
HDAC3-203ENST00000467533 THEM5Q8N1Q8 247 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 FBXL16Q8N461 479 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 ZCCHC9Q8N567 271 aaKnown RBP11.05□□□□□ -0.64
HDAC3-203ENST00000467533 FOXJ1Q92949 421 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 IGSF5Q9NSI5 407 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 GJB4Q9NTQ9 266 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 DSEQ9UL01 958 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 FNDC3AQ9Y2H6 1198 aaKnown RBP11.05□□□□□ -0.64
HDAC3-203ENST00000467533 PCDHB5Q9Y5E4 795 aa11.05□□□□□ -0.64
HDAC3-203ENST00000467533 GOLGA4Q13439 2230 aaKnown RBP11.05□□□□□ -0.64
HDAC3-203ENST00000467533 C2orf78A6NCI8 922 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 WISP1O95388 367 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 CYP11A1P05108 521 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 TCF3P15923 654 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 EIF2DP41214 584 aaKnown RBP11.04□□□□□ -0.64
HDAC3-203ENST00000467533 GRIA2P42262 883 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 WASP42768 502 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 SRSF1Q07955 248 aaKnown RBP eCLIP11.04□□□□□ -0.64
HDAC3-203ENST00000467533 C6orf118Q5T5N4 469 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 DIEXFQ68CQ4 756 aaKnown RBP11.04□□□□□ -0.64
HDAC3-203ENST00000467533 DHRS13Q6UX07 377 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 FILIP1Q7Z7B0 1213 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 C12orf40Q86WS4 652 aa11.04□□□□□ -0.64
HDAC3-203ENST00000467533 DCP1BQ8IZD4 617 aaKnown RBP11.04□□□□□ -0.64
HDAC3-203ENST00000467533 ZNF513Q8N8E2 541 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms