RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 SYNPOQ8N3V7 929 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 KBTBD7Q8WVZ9 684 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 CGRRF1Q99675 332 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 FAM83CQ9BQN1 747 aa16.52■□□□□ 0.24
HOXB3-204ENST00000465120 OTOGLQ3ZCN5 2332 aa16.52■□□□□ 0.23
HOXB3-204ENST00000465120 DENND4CQ5VZ89 1909 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 PVALEFA0A1B0GWK0 134 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 EXOC3O60645 756 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 ARSAP15289 507 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 WARSP23381 471 aaKnown RBP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 MAGEA11P43364 429 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 IFNAR2P48551 515 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 DNM1Q05193 864 aaKnown RBP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 FAM160A1Q05DH4 1040 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 DMWDQ09019 674 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 SIM2Q14190 667 aaPredicted RBP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 PUM1Q14671 1186 aaKnown RBP eCLIP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 KCNB1Q14721 858 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 PSMD6Q15008 389 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 PDGFRLQ15198 375 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 RSPO4Q2I0M5 234 aaPredicted RBP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 WDR72Q3MJ13 1102 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 MDH1BQ5I0G3 518 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 WDR44Q5JSH3 913 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 RESP18Q5W5W9 173 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 ATL3Q6DD88 541 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 VSTM1Q6UX27 236 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 GRAMD1CQ8IYS0 662 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 ARL14EPQ8N8R7 260 aaPredicted RBP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 MYRFLQ96LU7 910 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 MRPL45Q9BRJ2 306 aaKnown RBP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 CRTAC1Q9NQ79 661 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 HPS4Q9NQG7 708 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 DUS2Q9NX74 493 aaKnown RBP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 NXF1Q9UBU9 619 aaKnown RBP16.51■□□□□ 0.23
HOXB3-204ENST00000465120 SERTAD1Q9UHV2 236 aa16.51■□□□□ 0.23
HOXB3-204ENST00000465120 TADA3O75528 432 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 ABL1P00519 1130 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 HDCP19113 662 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 BIRC3Q13489 604 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 CCINQ13939 588 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 ZNF268Q14587 947 aaPredicted RBP16.5■□□□□ 0.23
HOXB3-204ENST00000465120 MTF1Q14872 753 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 KNOP1Q1ED39 458 aaKnown RBP16.5■□□□□ 0.23
HOXB3-204ENST00000465120 DENND5BQ6ZUT9 1274 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 CEP68Q76N32 757 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 LONP2Q86WA8 852 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 CPA6Q8N4T0 437 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 MYCBPAPQ8TBZ2 947 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 EXOC4Q96A65 974 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 PCED1BQ96HM7 432 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 SLC22A12Q96S37 553 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 TRPM5Q9NZQ8 1165 aa16.5■□□□□ 0.23
HOXB3-204ENST00000465120 CGNQ9P2M7 1197 aaKnown RBP16.5■□□□□ 0.23
HOXB3-204ENST00000465120 DMXL1Q9Y485 3027 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 GPR179Q6PRD1 2367 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 C2orf78A6NCI8 922 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 OTOL1A6NHN0 477 aaPredicted RBP16.49■□□□□ 0.23
HOXB3-204ENST00000465120 A8MXQ7 604 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 TRIM66O15016 1216 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 ATG13O75143 517 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 OBSL1O75147 1896 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 MYL6P60660 151 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 SPEM2Q0P670 501 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 IFRD2Q12894 506 aaPredicted RBP16.49■□□□□ 0.23
HOXB3-204ENST00000465120 SRSF5Q13243 272 aaKnown RBP16.49■□□□□ 0.23
HOXB3-204ENST00000465120 PKP1Q13835 747 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 TMEM196Q5HYL7 178 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 LAIR1Q6GTX8 287 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 LIMS2Q7Z4I7 341 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.49■□□□□ 0.23
HOXB3-204ENST00000465120 SPATA17Q96L03 361 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 EXOC1Q9NV70 894 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 C2orf42Q9NWW7 574 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 EHD2Q9NZN4 543 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 SLC8A2Q9UPR5 921 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 WNT6Q9Y6F9 365 aa16.49■□□□□ 0.23
HOXB3-204ENST00000465120 K7ESF4 209 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 HRO43593 1189 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 TACC1O75410 805 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 PAPSS2O95340 614 aaPredicted RBP16.48■□□□□ 0.23
HOXB3-204ENST00000465120 PTPN1P18031 435 aaKnown RBP16.48■□□□□ 0.23
HOXB3-204ENST00000465120 SDHBP21912 280 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 CNR2P34972 360 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 CASP4P49662 377 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 PDE6CP51160 858 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 GALK1P51570 392 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 EHHADHQ08426 723 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 NR1H3Q13133 447 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 PSMD2Q13200 908 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 FSTL4Q6MZW2 842 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 GOLGA5Q8TBA6 731 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 SH3RF2Q8TEC5 729 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 ZNF516Q92618 1163 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 ATP2A3Q93084 1043 aa16.48■□□□□ 0.23
HOXB3-204ENST00000465120 SYAP1Q96A49 352 aaPredicted RBP16.48■□□□□ 0.23
HOXB3-204ENST00000465120 P2RY13Q9BPV8 354 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms