RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 RUBCNQ92622 972 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 USP13Q92995 863 aaPredicted RBP23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 CCDC47Q96A33 483 aaKnown RBP23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 SYAP1Q96A49 352 aaPredicted RBP23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 CEP295NLQ96MC4 621 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 CRTAC1Q9NQ79 661 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 TRAV19A0A0A6YYK7 116 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 STAU1O95793 577 aaKnown RBP23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 CST3P01034 146 aaPredicted RBP23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 FAM163BP0C2L3 166 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 GNL1P36915 607 aaPredicted RBP23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 GRIK1P39086 918 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 AP3M2P53677 418 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 STK4Q13043 487 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 KMT5BQ4FZB7 885 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 KIAA0895Q8NCT3 520 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 MYCBPAPQ8TBZ2 947 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 SPATA17Q96L03 361 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 MRPL45Q9BRJ2 306 aaKnown RBP23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 GKN1Q9NS71 199 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 EHD2Q9NZN4 543 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 CCL26Q9Y258 94 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 GREB1Q4ZG55 1949 aa23.68■■□□□ 1.38
PDLIM7-206ENST00000463411 TRIM66O15016 1216 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 TADA3O75528 432 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 CKMP06732 381 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 USP17L7P0C7H9 530 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 BDNFP23560 247 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 SYKP43405 635 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 CXCL12P48061 93 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 PON2Q15165 354 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 MDH1BQ5I0G3 518 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 TXNDC11Q6PKC3 985 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 SPEM1Q8N4L4 309 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 SUMF1Q8NBK3 374 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 NELL1Q92832 810 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 PCED1BQ96HM7 432 aa23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 NXF1Q9UBU9 619 aaKnown RBP23.67■■□□□ 1.38
PDLIM7-206ENST00000463411 CFAP54Q96N23 3096 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 KIF20AO95235 890 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 PDE6CP51160 858 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 MYL6P60660 151 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 AMPD2Q01433 879 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 FAM160A1Q05DH4 1040 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 KCNB1Q14721 858 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 ZNF516Q92618 1163 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 SECISBP2LQ93073 1101 aaKnown RBP23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 RBM12Q9NTZ6 932 aaKnown RBP23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 NCDNQ9UBB6 729 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 HPSEQ9Y251 543 aa23.66■■□□□ 1.38
PDLIM7-206ENST00000463411 GVINP1Q7Z2Y8 2422 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 HELZP42694 1942 aaKnown RBP23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 ANAPC1Q9H1A4 1944 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 A8MXQ7 604 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 PDXKO00764 312 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 LILRB5O75023 590 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 CASP4P49662 377 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 RUNX3Q13761 415 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 PDGFRLQ15198 375 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 ZNF699Q32M78 642 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 DENND5BQ6ZUT9 1274 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 SLC9A9Q8IVB4 645 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 SYNPOQ8N3V7 929 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 FAM83CQ9BQN1 747 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 ELOVL4Q9GZR5 314 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 GZF1Q9H116 711 aaPredicted RBP23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 EPC1Q9H2F5 836 aa23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 SMG5Q9UPR3 1016 aaKnown RBP23.65■■□□□ 1.38
PDLIM7-206ENST00000463411 LRRIQ3A6PVS8 624 aaPredicted RBP23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 NR3C1P04150 777 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 RPN1P04843 607 aaKnown RBP23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 SATB1Q01826 763 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 MTF1Q14872 753 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 TDRD10Q5VZ19 366 aaKnown RBP23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 TTC16Q8NEE8 873 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 PARD3BQ8TEW8 1205 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 TMEM174Q8WUU8 243 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 EXOC4Q96A65 974 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 XYLT2Q9H1B5 865 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 KCTD10Q9H3F6 313 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 EBF3Q9H4W6 596 aa23.64■■□□□ 1.37
PDLIM7-206ENST00000463411 ATP8B3O60423 1300 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 CALUO43852 315 aaPredicted RBP23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 PTPN1P18031 435 aaKnown RBP23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 NDUFA8P51970 172 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 ZNF667Q5HYK9 610 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 TRIM68Q6AZZ1 485 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 Q6ZS52 159 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 CPA6Q8N4T0 437 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 B3GALNT2Q8NCR0 500 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 PLEKHO2Q8TD55 490 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 C8orf48Q96LL4 319 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 VRTNQ9H8Y1 702 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 GDPD2Q9HCC8 539 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 HPS4Q9NQG7 708 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 DMAC2Q9NW81 257 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 TRPM5Q9NZQ8 1165 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 FRMD4BQ9Y2L6 1034 aa23.63■■□□□ 1.37
PDLIM7-206ENST00000463411 TDGF1P13385 188 aa23.62■■□□□ 1.37
PDLIM7-206ENST00000463411 P4HA1P13674 534 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms