RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 NSFP46459 744 aaKnown RBP16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 RBM10P98175 930 aaKnown RBP16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 CLEC16AQ2KHT3 1053 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 SYCE2Q6PIF2 218 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 PDCL2Q8N4E4 241 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 WHAMMQ8TF30 809 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 CTNNBL1Q8WYA6 563 aaPredicted RBP16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 CASP10Q92851 521 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 PAAF1Q9BRP4 392 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 CACNG4Q9UBN1 327 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 USP15Q9Y4E8 981 aaPredicted RBP16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 LOC730098B7Z3J9 87 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 LILRB3O75022 631 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 KIF4AO95239 1232 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 CALCAP01258 141 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 FTLP02792 175 aaPredicted RBP16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 AARSP49588 968 aaKnown RBP eCLIP16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 ORC1Q13415 861 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 IFI16Q16666 785 aaKnown RBP16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 WSCD1Q658N2 575 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 ACAD10Q6JQN1 1059 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 LIMS2Q7Z4I7 341 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 ACOT1Q86TX2 421 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 THEM5Q8N1Q8 247 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 TMEM35BQ8NCS4 154 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 MSANTD4Q8NCY6 345 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 TRIM11Q96F44 468 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 SUSD3Q96L08 255 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 C16orf45Q96MC5 204 aaPredicted RBP16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 TWNKQ96RR1 684 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 PCDHB18PQ96TA0 734 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 PHF7Q9BWX1 381 aaPredicted RBP16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 VN1R3Q9BXE9 311 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 ZNF518BQ9C0D4 1074 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 ISCUQ9H1K1 167 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 HMGXB4Q9UGU5 601 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 NENFQ9UMX5 172 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 GUCA1BQ9UMX6 200 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 PCDHGC3Q9UN70 934 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 PRG3Q9Y2Y8 225 aaPredicted RBP16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 HCFC2Q9Y5Z7 792 aa16.09■□□□□ 0.17
TMEM39A-203ENST00000461654 TRIP11Q15643 1979 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 ANKRD62A6NC57 917 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 M0QZQ0 153 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 PDGFRBP09619 1106 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 TMEM253P0C7T8 217 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 PCSK1P29120 753 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 GALCP54803 685 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 NAP1L1P55209 391 aaKnown RBP16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 ELAVL2Q12926 359 aaKnown RBP16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 CBX2Q14781 532 aaPredicted RBP16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 CNGA2Q16280 664 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 TMEM31Q5JXX7 168 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 PASD1Q8IV76 773 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 RNF168Q8IYW5 571 aaPredicted RBP16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 CRYBG2Q8N1P7 616 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 HASPINQ8TF76 798 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 SLC22A17Q8WUG5 538 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 SECISBP2LQ93073 1101 aaKnown RBP16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 NOX5Q96PH1 765 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 C11orf16Q9NQ32 467 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 MYO1AQ9UBC5 1043 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 HESX1Q9UBX0 185 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 PCDHB8Q9UN66 801 aa16.08■□□□□ 0.16
TMEM39A-203ENST00000461654 DCXO43602 365 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 CYP1A1P04798 512 aaPredicted RBP16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 TYMPP19971 482 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 ABCB4P21439 1286 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 ARHGAP25P42331 645 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 BRCC3P46736 316 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 GNG11P61952 73 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 ITIH3Q06033 890 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 LIN9Q5TKA1 542 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 NAA35Q5VZE5 725 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 PALB2Q86YC2 1186 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 GPR65Q8IYL9 337 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 RNF10Q8N5U6 811 aaKnown RBP16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 TFAP2BQ92481 460 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 CYFIP2Q96F07 1278 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 LRFN3Q9BTN0 628 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 LACRTQ9GZZ8 138 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 LHX5Q9H2C1 402 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 ADAM7Q9H2U9 754 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 MARCH5Q9NX47 278 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 DDX43Q9NXZ2 648 aaKnown RBP16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 SSX2IPQ9Y2D8 614 aa16.07■□□□□ 0.16
TMEM39A-203ENST00000461654 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 MACROD2A1Z1Q3 448 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 RCCD1A6NED2 376 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 BTNL10A8MVZ5 291 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 I3L4J1 428 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 O00370 1275 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 GABRDO14764 452 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 SOD2P04179 222 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 CYP11A1P05108 521 aa16.06■□□□□ 0.16
TMEM39A-203ENST00000461654 MYBL1P10243 752 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms