RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TWF1Q12792 350 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SKIV2LQ15477 1246 aaKnown RBP11.96□□□□□ -0.5
SSBP1-202ENST00000461433 PKDCCQ504Y2 493 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SGO2Q562F6 1265 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 RARS2Q5T160 578 aaKnown RBP11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SDHAF4Q5VUM1 108 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 TMC5Q6UXY8 1006 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 EP400NLQ6ZTU2 488 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SLC47A2Q86VL8 602 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 TTC30AQ86WT1 665 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 ZNF606Q8WXB4 792 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 HLA-CQ95604 372 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SMARCD1Q96GM5 515 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SEPT5Q99719 369 aaPredicted RBP11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SMOQ99835 787 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 APOL5Q9BWW9 433 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 EDEM3Q9BZQ6 932 aa11.96□□□□□ -0.5
SSBP1-202ENST00000461433 SPTBN5Q9NRC6 3674 aaKnown RBP11.96□□□□□ -0.5
SSBP1-202ENST00000461433 ZNF638Q14966 1978 aaKnown RBP11.95□□□□□ -0.5
SSBP1-202ENST00000461433 A0A1W2PQJ5 194 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 F8VP50 259 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 H3BQ06 376 aaPredicted RBP11.95□□□□□ -0.5
SSBP1-202ENST00000461433 CCL16O15467 120 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 GFPT2O94808 682 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 GYPCP04921 128 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 CFHP08603 1231 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 POU2F2P09086 479 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 KCNA5P22460 613 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 ZNF75DP51815 510 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 CNGA2Q16280 664 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 LCLAT1Q6UWP7 414 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 CLEC20AQ6ZU45 233 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 CACNA2D4Q7Z3S7 1137 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 GPR149Q86SP6 731 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 SCN4BQ8IWT1 228 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 SMRP1Q8NCR6 262 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 STKLD1Q8NE28 680 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 GPR152Q8TDT2 470 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 DDX1Q92499 740 aaKnown RBP11.95□□□□□ -0.5
SSBP1-202ENST00000461433 C8orf48Q96LL4 319 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 SPAG5Q96R06 1193 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 MED10Q9BTT4 135 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 NUP58Q9BVL2 599 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 LRRC3Q9BY71 257 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 DUSP16Q9BY84 665 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 DNAI2Q9GZS0 605 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 ADAM7Q9H2U9 754 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 KRT82Q9NSB4 513 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 TSPAN16Q9UKR8 245 aa11.95□□□□□ -0.5
SSBP1-202ENST00000461433 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.95□□□□□ -0.5
SSBP1-202ENST00000461433 HHLA1C9JL84 531 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 AP1G2O75843 785 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 LRG1P02750 347 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 CYP11B1P15538 503 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 GNA15P30679 374 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 GRIK1P39086 918 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 STAT1P42224 750 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 ALDH1A3P47895 512 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 RPL10AP62906 217 aaKnown RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 PTK2Q05397 1052 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 CLUL1Q15846 466 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 GOLGA7BQ2TAP0 167 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 E4F1Q66K89 784 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 SPECC1LQ69YQ0 1117 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 ELMSAN1Q6PJG2 1045 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 DNAJB7Q7Z6W7 309 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 ANKRD52Q8NB46 1076 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 GIPC2Q8TF65 315 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 MRFAP1L1Q96HT8 127 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 SPATA17Q96L03 361 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 HCFC1R1Q9NWW0 138 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 DNMT3BQ9UBC3 853 aaKnown RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 CD207Q9UJ71 328 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 MYO6Q9UM54 1294 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 CAPN11Q9UMQ6 739 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 COG5Q9UP83 839 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 C5orf42Q9H799 3197 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 ATP8B3O60423 1300 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 DENND4AQ7Z401 1863 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 GRXCR2A6NFK2 248 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 LRRC53A6NM62 1247 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 TULP2O00295 520 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 NRG2O14511 850 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 TNFRSF10BO14763 440 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 TRIM66O15016 1216 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 THAP12O43422 761 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 MICAL2O94851 1124 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 FAM200BP0CF97 657 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 HMGA1P17096 107 aaKnown RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 NPR3P17342 541 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 EPHB3P54753 998 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 MAP3K7CLP57077 242 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 TFF2Q03403 129 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 ITIH3Q06033 890 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 TBX2Q13207 712 aaPredicted RBP11.94□□□□□ -0.5
SSBP1-202ENST00000461433 PLD1Q13393 1074 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 MTMR3Q13615 1198 aa11.94□□□□□ -0.5
SSBP1-202ENST00000461433 CYP26C1Q6V0L0 522 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms