RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CCDC142Q17RM4 750 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 IQCEQ6IPM2 695 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 ITIH5Q86UX2 942 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 EDAQ92838 391 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 CYFIP2Q96F07 1278 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 HNRNPABQ99729 332 aaKnown RBP23.85■■□□□ 1.41
C9orf3-209ENST00000460573 LPIN3Q9BQK8 851 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 MED10Q9BTT4 135 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 SIK3Q9Y2K2 1263 aa23.85■■□□□ 1.41
C9orf3-209ENST00000460573 TRIM66O15016 1216 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 VDRP11473 427 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 UCHL3P15374 230 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 PTPN2P17706 415 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 PLA2G5P39877 138 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 UBASH3AP57075 661 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 APBA1Q02410 837 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 NR1I3Q14994 352 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 VEPH1Q14D04 833 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 ARHGAP17Q68EM7 881 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 GJB7Q6PEY0 223 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 FUKQ8N0W3 1084 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 TTC9BQ8N6N2 239 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 C12orf29Q8N999 325 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 RBBP8NLQ8NC74 664 aaPredicted RBP23.84■■□□□ 1.41
C9orf3-209ENST00000460573 RNF214Q8ND24 703 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 SHC3Q92529 594 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 SMARCD1Q96GM5 515 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 PCMTD1Q96MG8 357 aaPredicted RBP23.84■■□□□ 1.41
C9orf3-209ENST00000460573 C5orf42Q9H799 3197 aa23.84■■□□□ 1.41
C9orf3-209ENST00000460573 A0A1W2PQC6 194 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 GRIK1P39086 918 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 ARHGAP44Q17R89 818 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 SGO2Q562F6 1265 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 FAM35AQ86V20 835 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 LEMD2Q8NC56 503 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 NEK11Q8NG66 645 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 SLC2A14Q8TDB8 520 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 C8orf48Q96LL4 319 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 NAP1L5Q96NT1 182 aaPredicted RBP23.83■■□□□ 1.41
C9orf3-209ENST00000460573 NAA15Q9BXJ9 866 aaKnown RBP23.83■■□□□ 1.41
C9orf3-209ENST00000460573 POMKQ9H5K3 350 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 FAM49BQ9NUQ9 324 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 CEP72Q9P209 647 aa23.83■■□□□ 1.41
C9orf3-209ENST00000460573 TEX33O43247 280 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 TPM3P06753 285 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 ANXA13P27216 316 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 CDR1P51861 262 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 ZNF132P52740 706 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 STILQ15468 1287 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 PAQR9Q6ZVX9 377 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 SCN4BQ8IWT1 228 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 TDRD5Q8NAT2 981 aaKnown RBP23.82■■□□□ 1.4
C9orf3-209ENST00000460573 PSMG2Q969U7 264 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 SPATA17Q96L03 361 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 STK33Q9BYT3 514 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 ZNF518BQ9C0D4 1074 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 GANQ9H2C0 597 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 WDR6Q9NNW5 1121 aaKnown RBP23.82■■□□□ 1.4
C9orf3-209ENST00000460573 AVENQ9NQS1 362 aaPredicted RBP23.82■■□□□ 1.4
C9orf3-209ENST00000460573 FAM207AQ9NSI2 230 aaPredicted RBP23.82■■□□□ 1.4
C9orf3-209ENST00000460573 FHOD1Q9Y613 1164 aa23.82■■□□□ 1.4
C9orf3-209ENST00000460573 CLDN5O00501 218 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 SOAT2O75908 522 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 CSH1P0DML2 217 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 CSH2P0DML3 217 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 KRT5P13647 590 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 CCDC130P13994 396 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 ATF6P18850 670 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 ZXDAP98168 799 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 TAF12Q16514 161 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 PPP1R26Q5T8A7 1209 aaPredicted RBP23.81■■□□□ 1.4
C9orf3-209ENST00000460573 SUGP1Q8IWZ8 645 aaKnown RBP23.81■■□□□ 1.4
C9orf3-209ENST00000460573 DMAP1Q9NPF5 467 aaPredicted RBP23.81■■□□□ 1.4
C9orf3-209ENST00000460573 EHD2Q9NZN4 543 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 DNMT3BQ9UBC3 853 aaKnown RBP23.81■■□□□ 1.4
C9orf3-209ENST00000460573 CDH22Q9UJ99 828 aa23.81■■□□□ 1.4
C9orf3-209ENST00000460573 ARIH1Q9Y4X5 557 aaPredicted RBP23.81■■□□□ 1.4
C9orf3-209ENST00000460573 TMEM221A6NGB7 291 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 RNF225M0QZC1 329 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-209ENST00000460573 M0R296 226 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 CBFA2T2O43439 604 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 AP1G2O75843 785 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 NOL4O94818 638 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 FGF19O95750 216 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 FAM200BP0CF97 657 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 CD19P15391 556 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 ADORA2BP29275 332 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 KLK7P49862 253 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 RAPGEF1Q13905 1077 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 DRAP1Q14919 205 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-209ENST00000460573 DDR2Q16832 855 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 TRIM67Q6ZTA4 783 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 HFE2Q6ZVN8 426 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 GRASPQ7Z6J2 395 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-209ENST00000460573 DNAJB7Q7Z6W7 309 aaPredicted RBP23.8■■□□□ 1.4
C9orf3-209ENST00000460573 PBXIP1Q96AQ6 731 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 CSNK1G1Q9HCP0 422 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 KRT82Q9NSB4 513 aa23.8■■□□□ 1.4
C9orf3-209ENST00000460573 USP8P40818 1118 aa23.79■■□□□ 1.4
C9orf3-209ENST00000460573 SLC8A3P57103 927 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms