RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ACAD8Q9UKU7 415 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 PPP2R2CQ9Y2T4 447 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 PABPN1LA6NDY0 278 aaKnown RBP10.94□□□□□ -0.66
USP39-210ENST00000459775 GJB5O95377 273 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 OR4Q2P0C623 313 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 CCDC130P13994 396 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 TNFAIP3P21580 790 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
USP39-210ENST00000459775 ABL2P42684 1182 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 AARSP49588 968 aaKnown RBP eCLIP10.94□□□□□ -0.66
USP39-210ENST00000459775 CDR2Q01850 454 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 INCA1Q0VD86 236 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 GRIN2CQ14957 1233 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 RAB30Q15771 203 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 FAM171A1Q5VUB5 890 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 DENND1BQ6P3S1 775 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 LRRC43Q8N309 656 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 ADAMTS19Q8TE59 1207 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 UHRF1Q96T88 793 aaPredicted RBP10.94□□□□□ -0.66
USP39-210ENST00000459775 BRINP2Q9C0B6 783 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 SNX25Q9H3E2 840 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 LZTFL1Q9NQ48 299 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 DDX43Q9NXZ2 648 aaKnown RBP10.94□□□□□ -0.66
USP39-210ENST00000459775 SLC4A7Q9Y6M7 1214 aa10.94□□□□□ -0.66
USP39-210ENST00000459775 TDRD15B5MCY1 1934 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 H0YHG0 523 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 PIK3R2O00459 728 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 CLDN5O00501 218 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 BAIAP3O94812 1187 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 SARNPP82979 210 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 SLC18A3Q16572 532 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 AAK1Q2M2I8 961 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 CCDC122Q5T0U0 273 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 TTC39BQ5VTQ0 682 aaPredicted RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 LCA5Q86VQ0 697 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 OR10T2Q8NGX3 314 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 GOLGA1Q92805 767 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 NT5C1AQ9BXI3 368 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 MTIF3Q9H2K0 278 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 TJP2Q9UDY2 1190 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 CYTH4Q9UIA0 394 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 NAGPAQ9UK23 515 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 ADAM28Q9UKQ2 775 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 PCDHA13Q9Y5I0 950 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 SSU72P8A0A1W2PR75 194 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 MYBPHLA2RUH7 354 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 EIF3CLB5ME19 914 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 ATMINO43313 823 aaPredicted RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 ATP2A2P16615 1042 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 ABCB4P21439 1286 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 ALDH7A1P49419 539 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 MAPRE1Q15691 268 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 ZSCAN26Q16670 478 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 LONRF1Q17RB8 773 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 NAA35Q5VZE5 725 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 ALKBH5Q6P6C2 394 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 PSRC1Q6PGN9 363 aaPredicted RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 KCNT2Q6UVM3 1135 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 RSPO2Q6UXX9 243 aaPredicted RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 LRRTM3Q86VH5 581 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 HERC6Q8IVU3 1022 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 REXO1L1PQ8IX06 675 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 CCAR2Q8N163 923 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 WDTC1Q8N5D0 677 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 TOP6BLQ8N6T0 577 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 C17orf50Q8WW18 174 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 HERVK_113Q902F9 699 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 BHMTQ93088 406 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 JAKMIP2Q96AA8 810 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 SUSD3Q96L08 255 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 UROC1Q96N76 676 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 EIF3CQ99613 913 aaKnown RBP10.93□□□□□ -0.66
USP39-210ENST00000459775 CRTAC1Q9NQ79 661 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 TMLHEQ9NVH6 421 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 SALL4Q9UJQ4 1053 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 GTF3C4Q9UKN8 822 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 MTUS1Q9ULD2 1270 aa10.93□□□□□ -0.66
USP39-210ENST00000459775 PTPRSQ13332 1948 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 M0QZQ0 153 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 C2CD2LO14523 706 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 GABRDO14764 452 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 TACC1O75410 805 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 LINC00271P0C7V0 271 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 RPL17P18621 184 aaKnown RBP10.92□□□□□ -0.66
USP39-210ENST00000459775 ADORA2BP29275 332 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 CYLC1P35663 651 aaPredicted RBP10.92□□□□□ -0.66
USP39-210ENST00000459775 MAGEA1P43355 309 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 RTP2Q5QGT7 225 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 PRSS55Q6UWB4 352 aaPredicted RBP10.92□□□□□ -0.66
USP39-210ENST00000459775 CCDC170Q8IYT3 715 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 AUTS2Q8WXX7 1259 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 PPP1R13BQ96KQ4 1090 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 FAM81BQ96LP2 452 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 MRPL9Q9BYD2 267 aaKnown RBP10.92□□□□□ -0.66
USP39-210ENST00000459775 TMCC3Q9ULS5 477 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 NENFQ9UMX5 172 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 HCN4Q9Y3Q4 1203 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 DAAM1Q9Y4D1 1078 aa10.92□□□□□ -0.66
USP39-210ENST00000459775 PCDHGA4Q9Y5G9 962 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms