RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 SHOC2Q9UQ13 582 aa20.52■□□□□ 0.87
CNEP1R1-203ENST00000458059 WDR81Q562E7 1941 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 ZNF646O15015 1829 aaPredicted RBP20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 TUBP50607 506 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 FAAP100Q0VG06 881 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 EFHC2Q5JST6 749 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 TEX2Q8IWB9 1127 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 PPIL6Q8IXY8 311 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 TSSK1BQ9BXA7 367 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 PORCNQ9H237 461 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 IKBKGQ9Y6K9 419 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 OATP04181 439 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 EIF3EP60228 445 aaKnown RBP20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 PTK7Q13308 1070 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 TTLL6Q8N841 843 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 SLC35B2Q8TB61 432 aa20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 CADM1Q9BY67 442 aaKnown RBP20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 COL2A1P02458 1487 aaPredicted RBP20.51■□□□□ 0.87
CNEP1R1-203ENST00000458059 KBTBD13C9JR72 458 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 KRT36O76013 467 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 ASS1P00966 412 aaKnown RBP20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 ITGAVP06756 1048 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 RBP3P10745 1247 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 MUM1Q2TAK8 710 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 ZNF699Q32M78 642 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 PRPF31Q8WWY3 499 aaKnown RBP20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 SLC13A1Q9BZW2 595 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 FAM237BA0A1B0GVD1 139 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 HAUS5O94927 633 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 PHBP35232 272 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 KPNB1Q14974 876 aaKnown RBP20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 TDRPQ86YL5 185 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 PDIK1LQ8N165 341 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 SPATA18Q8TC71 538 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 CPXM1Q96SM3 734 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 TMEM120AQ9BXJ8 343 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 ASCC2Q9H1I8 757 aaPredicted RBP20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 HMGXB4Q9UGU5 601 aa20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 FARP1Q9Y4F1 1045 aaPredicted RBP20.5■□□□□ 0.87
CNEP1R1-203ENST00000458059 GNAZP19086 355 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 ARFIP2P53365 341 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 BMPR2Q13873 1038 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 RCN1Q15293 331 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 PRPF39Q86UA1 669 aaKnown RBP20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 ALYREFQ86V81 257 aaKnown RBP20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 PPM1NQ8N819 430 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 NKD2Q969F2 451 aaPredicted RBP20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 TEPSINQ96N21 525 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 GPATCH2LQ9NWQ4 482 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 E5RJQ4 531 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 SMNDC1O75940 238 aaKnown RBP eCLIP20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 RCN2Q14257 317 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 PIGHQ14442 188 aaPredicted RBP20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 PARP6Q2NL67 630 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 TMEM192Q8IY95 271 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 DCAKDQ8WVC6 231 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 MCUR1Q96AQ8 359 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 SENP1Q9P0U3 644 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 SLC24A2Q9UI40 661 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 GYG2O15488 501 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 TOP3BO95985 862 aaKnown RBP20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 PSEN1P49768 467 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 MCL1Q07820 350 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 SLFN12LQ6IEE8 588 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 DARS2Q6PI48 645 aaKnown RBP20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 VPS52Q8N1B4 723 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 NAT8LQ8N9F0 302 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 UBA3Q8TBC4 463 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 TRAPPC12Q8WVT3 735 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 TRIM55Q9BYV6 548 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 FOXP3Q9BZS1 431 aa20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 DRG1Q9Y295 367 aaKnown RBP20.49■□□□□ 0.87
CNEP1R1-203ENST00000458059 C3orf70A6NLC5 250 aaPredicted RBP20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 ATP5HO75947 161 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 ZWINTO95229 277 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 KDELR1P24390 212 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 PTPN4P29074 926 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 RINLQ6ZS11 566 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 CDHR3Q6ZTQ4 885 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 CEP128Q6ZU80 1094 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 RNF149Q8NC42 400 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 WRNIP1Q96S55 665 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 NIF3L1Q9GZT8 377 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 ZNF214Q9UL59 606 aaPredicted RBP20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 HEY1Q9Y5J3 304 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 SNCAIPQ9Y6H5 919 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 TCRBV5S1A1TA0A578 114 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 C2CD2LO14523 706 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 MAP3K13O43283 966 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 UGT1A9O60656 530 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 DKC1O60832 514 aaKnown RBP eCLIP20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 INHBAP08476 426 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 MYL2P10916 166 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 NAMPTP43490 491 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 ZNF132P52740 706 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 ANO7Q6IWH7 933 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 BANPQ8N9N5 519 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 FLAD1Q8NFF5 587 aa20.48■□□□□ 0.87
CNEP1R1-203ENST00000458059 WDR60Q8WVS4 1066 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms