RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-205ENST00000456842 CCDC47Q96A33 483 aaKnown RBP28.28■■■□□ 2.12
SMIM12-205ENST00000456842 TRMT2BQ96GJ1 504 aaKnown RBP28.28■■■□□ 2.12
SMIM12-205ENST00000456842 CYP2S1Q96SQ9 504 aa28.28■■■□□ 2.12
SMIM12-205ENST00000456842 UXTQ9UBK9 157 aaPredicted RBP28.28■■■□□ 2.12
SMIM12-205ENST00000456842 A8MXQ7 604 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 SPECC1L-ADORA2AF8WAN1 911 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 DDX6P26196 483 aaKnown RBP eCLIP28.27■■■□□ 2.12
SMIM12-205ENST00000456842 CLDN10P78369 228 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 NCOA4Q13772 614 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 BECN1Q14457 450 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 MAPRE1Q15691 268 aaKnown RBP28.27■■■□□ 2.12
SMIM12-205ENST00000456842 ZNF699Q32M78 642 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 VSTM1Q6UX27 236 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 SCARA5Q6ZMJ2 495 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 TTC16Q8NEE8 873 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 SLC22A12Q96S37 553 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 C8orf33Q9H7E9 229 aaPredicted RBP28.27■■■□□ 2.12
SMIM12-205ENST00000456842 RBM12Q9NTZ6 932 aaKnown RBP28.27■■■□□ 2.12
SMIM12-205ENST00000456842 TDP1Q9NUW8 608 aa28.27■■■□□ 2.12
SMIM12-205ENST00000456842 CLDN5O00501 218 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 CALUO43852 315 aaPredicted RBP28.26■■■□□ 2.11
SMIM12-205ENST00000456842 FAM163BP0C2L3 166 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 CHRNB1P11230 501 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 CACNA2D1P54289 1103 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 USP46P62068 366 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 WDR44Q5JSH3 913 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 TRIM68Q6AZZ1 485 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 ADSSL1Q8N142 457 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 SDCBP2Q9H190 292 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 CHRDQ9H2X0 955 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 THG1LQ9NWX6 298 aaKnown RBP28.26■■■□□ 2.11
SMIM12-205ENST00000456842 ZMYM5Q9UJ78 669 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 FBXO4Q9UKT5 387 aa28.26■■■□□ 2.11
SMIM12-205ENST00000456842 CTHP32929 405 aa28.25■■■□□ 2.11
SMIM12-205ENST00000456842 AP3M2P53677 418 aa28.25■■■□□ 2.11
SMIM12-205ENST00000456842 MLLT6P55198 1093 aaPredicted RBP28.25■■■□□ 2.11
SMIM12-205ENST00000456842 C1orf220Q5T0J3 134 aa28.25■■■□□ 2.11
SMIM12-205ENST00000456842 TMEM174Q8WUU8 243 aa28.25■■■□□ 2.11
SMIM12-205ENST00000456842 B3GNT5Q9BYG0 378 aa28.25■■■□□ 2.11
SMIM12-205ENST00000456842 ZNF518BQ9C0D4 1074 aa28.25■■■□□ 2.11
SMIM12-205ENST00000456842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.25■■■□□ 2.11
SMIM12-205ENST00000456842 TMEM30AQ9NV96 361 aa28.25■■■□□ 2.11
SMIM12-205ENST00000456842 TRAF3IP3Q9Y228 551 aa28.25■■■□□ 2.11
SMIM12-205ENST00000456842 F8VP50 259 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 PLCB2Q00722 1185 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 GAS6Q14393 721 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 PON2Q15165 354 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 ZNF667Q5HYK9 610 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 ARL14EPQ8N8R7 260 aaPredicted RBP28.24■■■□□ 2.11
SMIM12-205ENST00000456842 TMC2Q8TDI7 906 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 SPATA17Q96L03 361 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 FAM83CQ9BQN1 747 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 VRTNQ9H8Y1 702 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 HPS4Q9NQG7 708 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 FRMD4BQ9Y2L6 1034 aa28.24■■■□□ 2.11
SMIM12-205ENST00000456842 NUP210Q8TEM1 1887 aaPredicted RBP28.23■■■□□ 2.11
SMIM12-205ENST00000456842 C2orf78A6NCI8 922 aa28.23■■■□□ 2.11
SMIM12-205ENST00000456842 LMNAP02545 664 aaKnown RBP28.23■■■□□ 2.11
SMIM12-205ENST00000456842 ARSAP15289 507 aa28.23■■■□□ 2.11
SMIM12-205ENST00000456842 ANXA13P27216 316 aa28.23■■■□□ 2.11
SMIM12-205ENST00000456842 ZACNQ401N2 412 aa28.23■■■□□ 2.11
SMIM12-205ENST00000456842 SV2AQ7L0J3 742 aa28.23■■■□□ 2.11
SMIM12-205ENST00000456842 RALGPS2Q86X27 583 aaPredicted RBP28.23■■■□□ 2.11
SMIM12-205ENST00000456842 SMYD4Q8IYR2 804 aaPredicted RBP28.23■■■□□ 2.11
SMIM12-205ENST00000456842 B3GALNT2Q8NCR0 500 aa28.23■■■□□ 2.11
SMIM12-205ENST00000456842 EBF3Q9H4W6 596 aa28.23■■■□□ 2.11
SMIM12-205ENST00000456842 EP300Q09472 2414 aaPredicted RBP28.23■■■□□ 2.11
SMIM12-205ENST00000456842 VPS13AQ96RL7 3174 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 TRAV19A0A0A6YYK7 116 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 OTOL1A6NHN0 477 aaPredicted RBP28.22■■■□□ 2.11
SMIM12-205ENST00000456842 SOBPA7XYQ1 873 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 AKAP3O75969 853 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 KIF20AO95235 890 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 NR2F2P24468 414 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 KCNB1Q14721 858 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 ITPRIPL2Q3MIP1 535 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 ZNF528Q3MIS6 628 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 SPOPLQ6IQ16 392 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 ZC3H14Q6PJT7 736 aaKnown RBP28.22■■■□□ 2.11
SMIM12-205ENST00000456842 DENND5BQ6ZUT9 1274 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 MSANTD3Q96H12 275 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 KIF9Q9HAQ2 790 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 PRMT8Q9NR22 394 aaPredicted RBP28.22■■■□□ 2.11
SMIM12-205ENST00000456842 GCNT4Q9P109 453 aa28.22■■■□□ 2.11
SMIM12-205ENST00000456842 GPR179Q6PRD1 2367 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 TRIM66O15016 1216 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 CKMP06732 381 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 TRIM49P0CI25 452 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 TRIM49CP0CI26 452 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 VAMP7P51809 220 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 ORC1Q13415 861 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 PNOCQ13519 176 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 Q6ZS52 159 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 GUF1Q8N442 669 aaKnown RBP28.21■■■□□ 2.11
SMIM12-205ENST00000456842 C8orf48Q96LL4 319 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 SEMA4AQ9H3S1 761 aa28.21■■■□□ 2.11
SMIM12-205ENST00000456842 HLA-DRAP01903 254 aa28.2■■■□□ 2.1
SMIM12-205ENST00000456842 USP17L7P0C7H9 530 aa28.2■■■□□ 2.1
SMIM12-205ENST00000456842 RUNX3Q13761 415 aa28.2■■■□□ 2.1
SMIM12-205ENST00000456842 ZNF268Q14587 947 aaPredicted RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms