RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 CPA6Q8N4T0 437 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 SPATA18Q8TC71 538 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 USP33Q8TEY7 942 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 KBTBD7Q8WVZ9 684 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 SAAL1Q96ER3 474 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
LMCD1-206ENST00000456506 CHAMP1Q96JM3 812 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.37
LMCD1-206ENST00000456506 NME7Q9Y5B8 376 aa12.77□□□□□ -0.37
LMCD1-206ENST00000456506 PCNX2A6NKB5 2137 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 TRAV19A0A0A6YYK7 116 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 H3BQV1 296 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 GIPC1O14908 333 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 ATP2C2O75185 946 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 OLFM2O95897 454 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 BMP15O95972 392 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 USP17L7P0C7H9 530 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 MAGEA11P43364 429 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 RPL10AP62906 217 aaKnown RBP12.76□□□□□ -0.37
LMCD1-206ENST00000456506 TFAMQ00059 246 aaKnown RBP12.76□□□□□ -0.37
LMCD1-206ENST00000456506 MESP2Q0VG99 397 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 POSTNQ15063 836 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 PMS2CLQ68D20 193 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 RNF43Q68DV7 783 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 PSAPL1Q6NUJ1 521 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 TOP6BLQ8N6T0 577 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 ARL14EPQ8N8R7 260 aaPredicted RBP12.76□□□□□ -0.37
LMCD1-206ENST00000456506 ATP2A3Q93084 1043 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 CBWD1Q9BRT8 395 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 EDEM2Q9BV94 578 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 LINC00597Q9H2U6 94 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 CRTAC1Q9NQ79 661 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 OLFML3Q9NRN5 406 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 RBAKQ9NYW8 714 aaPredicted RBP12.76□□□□□ -0.37
LMCD1-206ENST00000456506 SEL1LQ9UBV2 794 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 FBXO2Q9UK22 296 aaPredicted RBP12.76□□□□□ -0.37
LMCD1-206ENST00000456506 ITGA11Q9UKX5 1188 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 ARHGAP26Q9UNA1 814 aa12.76□□□□□ -0.37
LMCD1-206ENST00000456506 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
LMCD1-206ENST00000456506 HUS1O60921 280 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 CKMP06732 381 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 PROS1P07225 676 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 BCKDHBP21953 392 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 GARTP22102 1010 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 KCNA4P22459 653 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 LMO2P25791 158 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 USP46P62068 366 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 MYL7Q01449 175 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 CREB5Q02930 508 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 BRAPQ7Z569 592 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 SFTPA1Q8IWL2 248 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
LMCD1-206ENST00000456506 OLIG1Q8TAK6 271 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 SH3RF2Q8TEC5 729 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 ACDQ96AP0 544 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 SPATA17Q96L03 361 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 TTLL2Q9BWV7 592 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 MTMR12Q9C0I1 747 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 PDE11AQ9HCR9 933 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 TRPC7Q9HCX4 862 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 TMEM30AQ9NV96 361 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 STK17AQ9UEE5 414 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 RALYQ9UKM9 306 aaKnown RBP12.75□□□□□ -0.37
LMCD1-206ENST00000456506 SNX9Q9Y5X1 595 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 CLIC4Q9Y696 253 aa12.75□□□□□ -0.37
LMCD1-206ENST00000456506 IGF2RP11717 2491 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 PTPRBP23467 1997 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 TP53BP1Q12888 1972 aaPredicted RBP12.74□□□□□ -0.37
LMCD1-206ENST00000456506 PLXNB3Q9ULL4 1909 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 DMXL2Q8TDJ6 3036 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 NBEAQ8NFP9 2946 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 A0A087X0B3 334 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 GOLGA8IPA6NC78 632 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 GOLGA8JA6NMD2 632 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 C4orf47A7E2U8 309 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 PATE3B3GLJ2 98 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 RHOBTB1O94844 696 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 CAVIN2O95810 425 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 GAP43P17677 238 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 HOXD13P35453 343 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 IFNAR2P48551 515 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 LHX1P48742 406 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 ELF2Q15723 593 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 MDGA1Q8NFP4 955 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 OR5B17Q8NGF7 314 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 MYLPFQ96A32 169 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
LMCD1-206ENST00000456506 ACCSQ96QU6 501 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 TPSD1Q9BZJ3 242 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 RNF38Q9H0F5 515 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 MRPL44Q9H9J2 332 aaKnown RBP12.74□□□□□ -0.37
LMCD1-206ENST00000456506 INTS13Q9NVM9 706 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 TBC1D7Q9P0N9 293 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 MMP17Q9ULZ9 603 aa12.74□□□□□ -0.37
LMCD1-206ENST00000456506 INVSQ9Y283 1065 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms