RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 NCOA4Q13772 614 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 BECN1Q14457 450 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 MAPRE1Q15691 268 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZNF699Q32M78 642 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 TXNDC11Q6PKC3 985 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 TSSK4Q6SA08 328 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 SCARA5Q6ZMJ2 495 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 RIN3Q8TB24 985 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 MYCBPAPQ8TBZ2 947 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 SLC22A12Q96S37 553 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 GKN1Q9NS71 199 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 TDP1Q9NUW8 608 aa17.56■□□□□ 0.4
NCKIPSD-208ENST00000454134 A8MXQ7 604 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 SPECC1L-ADORA2AF8WAN1 911 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 CLDN5O00501 218 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 CALUO43852 315 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 CHRNB1P11230 501 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 PTPN1P18031 435 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 CTHP32929 405 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 CACNA2D1P54289 1103 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 USP46P62068 366 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 VSTM1Q6UX27 236 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 TTC16Q8NEE8 873 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 TMEM174Q8WUU8 243 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 CYP2S1Q96SQ9 504 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 SDCBP2Q9H190 292 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 CHRDQ9H2X0 955 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 C8orf33Q9H7E9 229 aaPredicted RBP17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 RBM12Q9NTZ6 932 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 THG1LQ9NWX6 298 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZMYM5Q9UJ78 669 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 FBXO4Q9UKT5 387 aa17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZNF638Q14966 1978 aaKnown RBP17.55■□□□□ 0.4
NCKIPSD-208ENST00000454134 FAM163BP0C2L3 166 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 AP3M2P53677 418 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 MLLT6P55198 1093 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 PLCB2Q00722 1185 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZNF667Q5HYK9 610 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 WDR44Q5JSH3 913 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 C1orf220Q5T0J3 134 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 TRIM68Q6AZZ1 485 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZC3H14Q6PJT7 736 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 ADSSL1Q8N142 457 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 B3GALNT2Q8NCR0 500 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 TMC2Q8TDI7 906 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 SPATA17Q96L03 361 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 B3GNT5Q9BYG0 378 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZNF518BQ9C0D4 1074 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 VRTNQ9H8Y1 702 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 TMEM30AQ9NV96 361 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 TRAF3IP3Q9Y228 551 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 FRMD4BQ9Y2L6 1034 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 PTPRDP23468 1912 aa17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 KIF26AQ9ULI4 1882 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-208ENST00000454134 GREB1Q4ZG55 1949 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 DMDP11532 3685 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 TRAV19A0A0A6YYK7 116 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 C2orf78A6NCI8 922 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 F8VP50 259 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 CKMP06732 381 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 NR2F2P24468 414 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 ANXA13P27216 316 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 KCNB1Q14721 858 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 PON2Q15165 354 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 ITPRIPL2Q3MIP1 535 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZACNQ401N2 412 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 SV2AQ7L0J3 742 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 RALGPS2Q86X27 583 aaPredicted RBP17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 SMYD4Q8IYR2 804 aaPredicted RBP17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 ARL14EPQ8N8R7 260 aaPredicted RBP17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 MSANTD3Q96H12 275 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 FAM83CQ9BQN1 747 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 EBF3Q9H4W6 596 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 HPS4Q9NQG7 708 aa17.53■□□□□ 0.4
NCKIPSD-208ENST00000454134 OTOL1A6NHN0 477 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 SOBPA7XYQ1 873 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 TRIM66O15016 1216 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 AKAP3O75969 853 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 KIF20AO95235 890 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 LMNAP02545 664 aaKnown RBP17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 TRIM49P0CI25 452 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 TRIM49CP0CI26 452 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 ARSAP15289 507 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 VAMP7P51809 220 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 PNOCQ13519 176 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 GAS6Q14393 721 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 ZNF528Q3MIS6 628 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 SPOPLQ6IQ16 392 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 DENND5BQ6ZUT9 1274 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 FMR1NBQ8N0W7 255 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 GUF1Q8N442 669 aaKnown RBP17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 SEMA4AQ9H3S1 761 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 KIF9Q9HAQ2 790 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 PRMT8Q9NR22 394 aaPredicted RBP17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 GCNT4Q9P109 453 aa17.52■□□□□ 0.4
NCKIPSD-208ENST00000454134 FANCMQ8IYD8 2048 aa17.52■□□□□ 0.39
NCKIPSD-208ENST00000454134 CFAP54Q96N23 3096 aa17.51■□□□□ 0.39
NCKIPSD-208ENST00000454134 ANAPC1Q9H1A4 1944 aa17.51■□□□□ 0.39
NCKIPSD-208ENST00000454134 HLA-DRAP01903 254 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms