RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 ZNF707Q96C28 371 aaPredicted RBP25.52■■□□□ 1.68
CPSF4-207ENST00000451876 SMARCD1Q96GM5 515 aa25.52■■□□□ 1.68
CPSF4-207ENST00000451876 PRDM6Q9NQX0 595 aa25.52■■□□□ 1.68
CPSF4-207ENST00000451876 TSPAN16Q9UKR8 245 aa25.52■■□□□ 1.68
CPSF4-207ENST00000451876 O00370 1275 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 BEST1O76090 585 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 GFPT2O94808 682 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 GYPCP04921 128 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 HOXA9P31269 272 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 SSTR3P32745 418 aaPredicted RBP25.51■■□□□ 1.67
CPSF4-207ENST00000451876 SOX5P35711 763 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 TUFMP49411 452 aaKnown RBP25.51■■□□□ 1.67
CPSF4-207ENST00000451876 VSTM1Q6UX27 236 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 SCN4BQ8IWT1 228 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 HLA-CQ95604 372 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 KCNK16Q96T55 309 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 KIAA1257Q9ULG3 409 aa25.51■■□□□ 1.67
CPSF4-207ENST00000451876 ZNF638Q14966 1978 aaKnown RBP25.5■■□□□ 1.67
CPSF4-207ENST00000451876 UNC80Q8N2C7 3258 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 NOTCH4Q99466 2003 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 F8VP50 259 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 LRG1P02750 347 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 GRIK1P39086 918 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 ZNF75DP51815 510 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 GOLGA7BQ2TAP0 167 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 SPECC1LQ69YQ0 1117 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 CLEC20AQ6ZU45 233 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 RTL10Q7L3V2 364 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 TTC30AQ86WT1 665 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 ZMIZ2Q8NF64 920 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 SMOQ99835 787 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.5■■□□□ 1.67
CPSF4-207ENST00000451876 ATP8B3O60423 1300 aa25.5■■□□□ 1.67
CPSF4-207ENST00000451876 LRRC53A6NM62 1247 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 AP1G2O75843 785 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 PAPLNO95428 1278 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 HNRNPA1P09651 372 aaKnown RBP eCLIP25.49■■□□□ 1.67
CPSF4-207ENST00000451876 HOXB8P17481 243 aaPredicted RBP25.49■■□□□ 1.67
CPSF4-207ENST00000451876 STAT1P42224 750 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 ALDH1A3P47895 512 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 CMASQ8NFW8 434 aaPredicted RBP25.49■■□□□ 1.67
CPSF4-207ENST00000451876 GIPC2Q8TF65 315 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 ZNF606Q8WXB4 792 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 NUP58Q9BVL2 599 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 PRKD2Q9BZL6 878 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 S1PR5Q9H228 398 aa25.49■■□□□ 1.67
CPSF4-207ENST00000451876 THAP12O43422 761 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 CFHP08603 1231 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 FAM200BP0CF97 657 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 MAP3K7CLP57077 242 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 PTK2Q05397 1052 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 SMYD5Q6GMV2 418 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 SMRP1Q8NCR6 262 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 CPLX3Q8WVH0 158 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 CSNK1G1Q9HCP0 422 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 DENND4AQ7Z401 1863 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 OBSL1O75147 1896 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 CYP11B1P15538 503 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 NPR3P17342 541 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 E4F1Q66K89 784 aaPredicted RBP25.48■■□□□ 1.67
CPSF4-207ENST00000451876 LCLAT1Q6UWP7 414 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 EPS8L1Q8TE68 723 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 MRFAP1L1Q96HT8 127 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 DUSP16Q9BY84 665 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 DMAP1Q9NPF5 467 aaPredicted RBP25.48■■□□□ 1.67
CPSF4-207ENST00000451876 HCFC1R1Q9NWW0 138 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 MYO16Q9Y6X6 1858 aa25.48■■□□□ 1.67
CPSF4-207ENST00000451876 A0A1W2PQJ5 194 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 TRIM66O15016 1216 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 MICAL2O94851 1124 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 RPL10AP62906 217 aaKnown RBP25.47■■□□□ 1.67
CPSF4-207ENST00000451876 ARID5AQ03989 594 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 PLD1Q13393 1074 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 MTMR3Q13615 1198 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 CNGA2Q16280 664 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 ANKRD52Q8NB46 1076 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 UBA3Q8TBC4 463 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 SMG7Q92540 1137 aaKnown RBP25.47■■□□□ 1.67
CPSF4-207ENST00000451876 C8orf48Q96LL4 319 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 EDEM3Q9BZQ6 932 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 CD207Q9UJ71 328 aa25.47■■□□□ 1.67
CPSF4-207ENST00000451876 M0QYV0 167 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 CASP14P31944 242 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 EPHB3P54753 998 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 TFF2Q03403 129 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 PKDCCQ504Y2 493 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 TMC6Q7Z403 805 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 GPR149Q86SP6 731 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 NOP9Q86U38 636 aaKnown RBP25.46■■□□□ 1.67
CPSF4-207ENST00000451876 ADAM7Q9H2U9 754 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 MYO6Q9UM54 1294 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 CAPN11Q9UMQ6 739 aa25.46■■□□□ 1.67
CPSF4-207ENST00000451876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.46■■□□□ 1.674e-6■□□□□ 10.1
CPSF4-207ENST00000451876 TULP2O00295 520 aa25.45■■□□□ 1.67
CPSF4-207ENST00000451876 PDE6CP51160 858 aa25.45■■□□□ 1.67
CPSF4-207ENST00000451876 ITIH3Q06033 890 aa25.45■■□□□ 1.67
CPSF4-207ENST00000451876 PDE4CQ08493 712 aa25.45■■□□□ 1.67
CPSF4-207ENST00000451876 STILQ15468 1287 aa25.45■■□□□ 1.67
CPSF4-207ENST00000451876 DDX1Q92499 740 aaKnown RBP25.45■■□□□ 1.67
CPSF4-207ENST00000451876 PSMG2Q969U7 264 aa25.45■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms