RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 TSSK4Q6SA08 328 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 C4orf50Q6ZRC1 276 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 CELF5Q8N6W0 485 aaKnown RBP12.36□□□□□ -0.43
CCDC197-203ENST00000449472 RIN3Q8TB24 985 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 BPIFB1Q8TDL5 484 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 NKD2Q969F2 451 aaPredicted RBP12.36□□□□□ -0.43
CCDC197-203ENST00000449472 MYRFLQ96LU7 910 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 SLC22A12Q96S37 553 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 GKN1Q9NS71 199 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 OBP2AQ9NY56 170 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 TRAF3IP3Q9Y228 551 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 MRPS17Q9Y2R5 130 aaKnown RBP12.36□□□□□ -0.43
CCDC197-203ENST00000449472 PTPRDP23468 1912 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 ATG2BQ96BY7 2078 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 GVINP1Q7Z2Y8 2422 aa12.36□□□□□ -0.43
CCDC197-203ENST00000449472 A8MXQ7 604 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 CLDN5O00501 218 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 LAMTOR5O43504 91 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 CHRNB1P11230 501 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 AVPR1AP37288 418 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 AP3M2P53677 418 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 CACNA2D1P54289 1103 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 MLLT6P55198 1093 aaPredicted RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 USP46P62068 366 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 CSTF1Q05048 431 aaKnown RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 MTAPQ13126 283 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 PNOCQ13519 176 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 MAPRE1Q15691 268 aaKnown RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 WDR44Q5JSH3 913 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 TXNDC11Q6PKC3 985 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 VSTM1Q6UX27 236 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 SMYD4Q8IYR2 804 aaPredicted RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 FMR1NBQ8N0W7 255 aaPredicted RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 CCDC47Q96A33 483 aaKnown RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 TRMT2BQ96GJ1 504 aaKnown RBP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 FAM83CQ9BQN1 747 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 B3GNT5Q9BYG0 378 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 SDCBP2Q9H190 292 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 SMYD3Q9H7B4 428 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC197-203ENST00000449472 TDP1Q9NUW8 608 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 TMEM30AQ9NV96 361 aa12.35□□□□□ -0.43
CCDC197-203ENST00000449472 PATJQ8NI35 1801 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 FANCMQ8IYD8 2048 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 C2orf78A6NCI8 922 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 OTOL1A6NHN0 477 aaPredicted RBP12.34□□□□□ -0.43
CCDC197-203ENST00000449472 SPECC1L-ADORA2AF8WAN1 911 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 AKAP3O75969 853 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 CLSTN1O94985 981 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 NR2F2P24468 414 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 DDX6P26196 483 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC197-203ENST00000449472 RPS9P46781 194 aaKnown RBP12.34□□□□□ -0.43
CCDC197-203ENST00000449472 NUCB2P80303 420 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 ADAM9Q13443 819 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 GAS6Q14393 721 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 KCNB1Q14721 858 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 ZNF699Q32M78 642 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 ZACNQ401N2 412 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 ZNF667Q5HYK9 610 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 TRIM68Q6AZZ1 485 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 ARL14EPQ8N8R7 260 aaPredicted RBP12.34□□□□□ -0.43
CCDC197-203ENST00000449472 B3GALNT2Q8NCR0 500 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 ERCC4Q92889 916 aaPredicted RBP12.34□□□□□ -0.43
CCDC197-203ENST00000449472 EEF2KMTQ96G04 330 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 SPATA17Q96L03 361 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 ZNF518BQ9C0D4 1074 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 EBF3Q9H4W6 596 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 VRTNQ9H8Y1 702 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 TRPC7Q9HCX4 862 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 RBM12Q9NTZ6 932 aaKnown RBP12.34□□□□□ -0.43
CCDC197-203ENST00000449472 THG1LQ9NWX6 298 aaKnown RBP12.34□□□□□ -0.43
CCDC197-203ENST00000449472 UXTQ9UBK9 157 aaPredicted RBP12.34□□□□□ -0.43
CCDC197-203ENST00000449472 FRMD4BQ9Y2L6 1034 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 FRYLO94915 3013 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
CCDC197-203ENST00000449472 SOBPA7XYQ1 873 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 F8VP50 259 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 IKBKBO14920 756 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 MAGEA9P43362 315 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 VAMP7P51809 220 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 PPP3CAQ08209 521 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 ORC1Q13415 861 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 PON2Q15165 354 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 NFIL3Q16649 462 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 SPOPLQ6IQ16 392 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 DENND5BQ6ZUT9 1274 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 PAQR9Q6ZVX9 377 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 GUF1Q8N442 669 aaKnown RBP12.33□□□□□ -0.44
CCDC197-203ENST00000449472 TTC16Q8NEE8 873 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 ENGASEQ8NFI3 743 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 C8orf48Q96LL4 319 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
CCDC197-203ENST00000449472 C8orf33Q9H7E9 229 aaPredicted RBP12.33□□□□□ -0.44
CCDC197-203ENST00000449472 HPS4Q9NQG7 708 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms