RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 NRG2O14511 850 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 NOL4O94818 638 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 LRG1P02750 347 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 HNRNPA1P09651 372 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 HAPLN1P10915 354 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 HOXA9P31269 272 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 ZNF132P52740 706 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 FANCCQ00597 558 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 ITIH3Q06033 890 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 SMARCB1Q12824 385 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 CBX2Q14781 532 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 SMAD2Q15796 467 aaKnown RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 DDR2Q16832 855 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 KLHDC7AQ5VTJ3 777 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 IQCEQ6IPM2 695 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 CES5AQ6NT32 575 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 GRASPQ7Z6J2 395 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 FAM35AQ86V20 835 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 SUSD6Q92537 303 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 HEXIM2Q96MH2 286 aaKnown RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 MED10Q9BTT4 135 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 GANQ9H2C0 597 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 POMKQ9H5K3 350 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 ABCB6Q9NP58 842 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 ACP6Q9NPH0 428 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 KRT82Q9NSB4 513 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 FAM207AQ9NSI2 230 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-211ENST00000449159 HSFX1Q9UBD0 423 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 DNAJC12Q9UKB3 198 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 ANAPC1Q9H1A4 1944 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 TECTAO75443 2155 aa11.3□□□□□ -0.6
SMPD4-211ENST00000449159 XYLBO75191 536 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 SERPINC1P01008 464 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 KRT5P13647 590 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 UCHL3P15374 230 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 ADORA2BP29275 332 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 TUFMP49411 452 aaKnown RBP11.29□□□□□ -0.6
SMPD4-211ENST00000449159 MFAP3P55082 362 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 YWHAEP62258 255 aaKnown RBP11.29□□□□□ -0.6
SMPD4-211ENST00000449159 TPM4P67936 248 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 SLC5A9Q2M3M2 681 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 PPP1R26Q5T8A7 1209 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-211ENST00000449159 HFE2Q6ZVN8 426 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 RTL10Q7L3V2 364 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 GAS2L3Q86XJ1 694 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 TTC39CQ8N584 583 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 GIPC2Q8TF65 315 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 TFAP2BQ92481 460 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 SHC3Q92529 594 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 ERGIC2Q96RQ1 377 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 CORO1BQ9BR76 489 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 NAA15Q9BXJ9 866 aaKnown RBP11.29□□□□□ -0.6
SMPD4-211ENST00000449159 GPR88Q9GZN0 384 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 FAM124BQ9H5Z6 455 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-211ENST00000449159 PIDD1Q9HB75 910 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 PLCB1Q9NQ66 1216 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 DNMT3BQ9UBC3 853 aaKnown RBP11.29□□□□□ -0.6
SMPD4-211ENST00000449159 CNTN6Q9UQ52 1028 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 CFAP54Q96N23 3096 aa11.29□□□□□ -0.6
SMPD4-211ENST00000449159 F8VP50 259 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 AP1G2O75843 785 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 BEST1O76090 585 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 POU2F2P09086 479 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 CD19P15391 556 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 SP100P23497 879 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-211ENST00000449159 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
SMPD4-211ENST00000449159 GRIK1P39086 918 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 USP8P40818 1118 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 MTHFRP42898 656 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 MAGEA11P43364 429 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 ALDH1A3P47895 512 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 EPHB3P54753 998 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 PLD1Q13393 1074 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 RAPGEF1Q13905 1077 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 NR1I3Q14994 352 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 ATAT1Q5SQI0 421 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 VSTM1Q6UX27 236 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 ZMIZ2Q8NF64 920 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 CYFIP2Q96F07 1278 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 SMARCD1Q96GM5 515 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 PCMTD1Q96MG8 357 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-211ENST00000449159 RIPOR3Q96MK2 946 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 KCNK16Q96T55 309 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 HNRNPABQ99729 332 aaKnown RBP11.28□□□□□ -0.6
SMPD4-211ENST00000449159 SMOQ99835 787 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 RBSNQ9H1K0 784 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 ZNF334Q9HCZ1 680 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-211ENST00000449159 WDR6Q9NNW5 1121 aaKnown RBP11.28□□□□□ -0.6
SMPD4-211ENST00000449159 IFNKQ9P0W0 207 aa11.28□□□□□ -0.6
SMPD4-211ENST00000449159 MUTYHQ9UIF7 546 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms