RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ITIH5Q86UX2 942 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 ZC3H3Q8IXZ2 948 aaKnown RBP15.55■□□□□ 0.08
USP39-206ENST00000448971 LEMD2Q8NC56 503 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 TAS1R2Q8TE23 839 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 TAF4BQ92750 862 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 NELL1Q92832 810 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 MYLPFQ96A32 169 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 CLDN23Q96B33 292 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 CEP63Q96MT8 703 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 HINFPQ9BQA5 517 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 BCO2Q9BYV7 579 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 VRTNQ9H8Y1 702 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 TMLHEQ9NVH6 421 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 ARMCX3Q9UH62 379 aaPredicted RBP15.55■□□□□ 0.08
USP39-206ENST00000448971 GTF3C4Q9UKN8 822 aa15.55■□□□□ 0.08
USP39-206ENST00000448971 PATJQ8NI35 1801 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 SHISA7A6NL88 538 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 PDGFRBP09619 1106 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 ATF6P18850 670 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 LMO2P25791 158 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 GTF2H1P32780 548 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 CYP27A1Q02318 531 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 MAPRE1Q15691 268 aaKnown RBP15.54■□□□□ 0.08
USP39-206ENST00000448971 SPOPLQ6IQ16 392 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 C4orf50Q6ZRC1 276 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 LIMS2Q7Z4I7 341 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 NPAS3Q8IXF0 933 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 ZBTB44Q8NCP5 570 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 PHF12Q96QT6 1004 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 KXD1Q9BQD3 176 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 LPIN3Q9BQK8 851 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 PLA2G2FQ9BZM2 168 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 DNAJC25Q9H1X3 360 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 METTL14Q9HCE5 456 aaKnown RBP15.54■□□□□ 0.08
USP39-206ENST00000448971 LTB4R2Q9NPC1 389 aa15.54■□□□□ 0.08
USP39-206ENST00000448971 SPATA6Q9NWH7 488 aaPredicted RBP15.54■□□□□ 0.08
USP39-206ENST00000448971 MYBPHLA2RUH7 354 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 ZNF197O14709 1029 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 LAMTOR5O43504 91 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 LILRB5O75023 590 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 ATP2C2O75185 946 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 ASS1P00966 412 aaKnown RBP15.53■□□□□ 0.08
USP39-206ENST00000448971 HAPLN1P10915 354 aaPredicted RBP15.53■□□□□ 0.08
USP39-206ENST00000448971 CEBPBP17676 345 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 GNL1P36915 607 aaPredicted RBP15.53■□□□□ 0.08
USP39-206ENST00000448971 PFKPQ01813 784 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 CSTF1Q05048 431 aaKnown RBP15.53■□□□□ 0.08
USP39-206ENST00000448971 UBXN2BQ14CS0 331 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 RSPO4Q2I0M5 234 aaPredicted RBP15.53■□□□□ 0.08
USP39-206ENST00000448971 MDH1BQ5I0G3 518 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 PSMG2Q969U7 264 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 GCNAQ96QF7 691 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 PKMYT1Q99640 499 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 DUSP9Q99956 384 aaKnown RBP15.53■□□□□ 0.08
USP39-206ENST00000448971 DPEP3Q9H4B8 488 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 ABCB6Q9NP58 842 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 CRTAC1Q9NQ79 661 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 ASB3Q9Y575 518 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 PCDHGA2Q9Y5H1 932 aa15.53■□□□□ 0.08
USP39-206ENST00000448971 ECI2O75521 394 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 MAGEA9P43362 315 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 ASPAP45381 313 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 GPR15P49685 360 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 CDH8P55286 799 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 CFAP221Q4G0U5 840 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 PRSS36Q5K4E3 855 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 FOXR2Q6PJQ5 311 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 FILIP1Q7Z7B0 1213 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 SCN4BQ8IWT1 228 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 B3GALNT2Q8NCR0 500 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 FBXL13Q8NEE6 735 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 GIPC2Q8TF65 315 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 TCEAL4Q96EI5 215 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 FUBP3Q96I24 572 aaKnown RBP eCLIP15.52■□□□□ 0.08
USP39-206ENST00000448971 NELL2Q99435 816 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 NIF3L1Q9GZT8 377 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 SLITRK6Q9H5Y7 841 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 AVENQ9NQS1 362 aaPredicted RBP15.52■□□□□ 0.08
USP39-206ENST00000448971 MAGEC2Q9UBF1 373 aaPredicted RBP15.52■□□□□ 0.08
USP39-206ENST00000448971 DACH1Q9UI36 760 aa15.52■□□□□ 0.08
USP39-206ENST00000448971 KMT2BQ9UMN6 2715 aaPredicted RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 A0A1W2PRU2 124 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 FGFR1OPO95684 399 aaKnown RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 MBD3O95983 291 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 FAM163BP0C2L3 166 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 GJA1P17302 382 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 TRIM21P19474 475 aaKnown RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 TGM1P22735 817 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 CYP2F1P24903 491 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 TARSP26639 723 aaKnown RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 ANXA13P27216 316 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 CCR2P41597 374 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 RPS9P46781 194 aaKnown RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 RPL10AP62906 217 aaKnown RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 TPD52L1Q16890 204 aaPredicted RBP15.51■□□□□ 0.07
USP39-206ENST00000448971 CBWD6Q4V339 395 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 WDR44Q5JSH3 913 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 CBWD3Q5JTY5 395 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 CBWD5Q5RIA9 395 aa15.51■□□□□ 0.07
USP39-206ENST00000448971 SDHAF4Q5VUM1 108 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms