RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 MROH7Q68CQ1 1323 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 ZNF806P0C7X5 589 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 ATP6V1C1P21283 382 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 PIK3CAP42336 1068 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 NEDD8Q15843 81 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 GSTA3Q16772 222 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 AKIRIN2Q53H80 203 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 FGD2Q7Z6J4 655 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 TAF8Q7Z7C8 310 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 FBXO11Q86XK2 927 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 BORCS5Q969J3 196 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 PPP1R36Q96LQ0 422 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 PLEKHG4BQ96PX9 1271 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 ERGIC2Q96RQ1 377 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 EPAS1Q99814 870 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMC6-207ENST00000448223 GPC6Q9Y625 555 aaPredicted RBP9.57□□□□□ -0.88
SMC6-207ENST00000448223 ATMINO43313 823 aaPredicted RBP9.57□□□□□ -0.88
SMC6-207ENST00000448223 ETS2P15036 469 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 NUDT2P50583 147 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 MPP3Q13368 585 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 KLHDC7AQ5VTJ3 777 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 C11orf88Q6PI97 169 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 BARGINQ6ZT62 677 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 UTS2BQ765I0 119 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 SNX19Q92543 992 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 MAGEB18Q96M61 343 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 BLOC1S4Q9NUP1 217 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 ANAPC7Q9UJX3 599 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 AK5Q9Y6K8 562 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 PNMA6FA0A0J9YX94 578 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 NFKBIAP25963 317 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 PIK3R1P27986 724 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 CHN2P52757 468 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 RRM2BQ7LG56 351 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 POC5Q8NA72 575 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 LRRC15Q8TF66 581 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 RBM17Q96I25 401 aaKnown RBP9.57□□□□□ -0.88
SMC6-207ENST00000448223 PNMA5Q96PV4 448 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 CIDEBQ9UHD4 219 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 SH3BP1Q9Y3L3 701 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 CAMTA1Q9Y6Y1 1673 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 KCPQ6ZWJ8 1503 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 NOTOA8MTQ0 251 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 RPS6KA5O75582 802 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 VAV1P15498 845 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 ZNF23P17027 643 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 ITIH2P19823 946 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 ARPP19P56211 112 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 POU5F1BQ06416 359 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 SLC29A2Q14542 456 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 SHROOM1Q2M3G4 852 aaPredicted RBP9.57□□□□□ -0.88
SMC6-207ENST00000448223 DDIASQ8IXT1 998 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 CYP2W1Q8TAV3 490 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 DGCR14Q96DF8 476 aaKnown RBP9.57□□□□□ -0.88
SMC6-207ENST00000448223 TEX13BQ9BXU2 312 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 OSGEPQ9NPF4 335 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 TIMMDC1Q9NPL8 285 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 DNAJC12Q9UKB3 198 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 BAIAP2Q9UQB8 552 aa9.57□□□□□ -0.88
SMC6-207ENST00000448223 A0A0G2JPF8 293 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 PVALEFA0A1B0GWK0 134 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 HNRNPCL3B7ZW38 293 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 ZBTB39O15060 712 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 SLC26A4O43511 780 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 DGKIO75912 1065 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 NR3C1P04150 777 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 HNRNPCL4P0DMR1 293 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 KCNJ1P48048 391 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 GCLMP48507 274 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 NR1H2P55055 460 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 KCNMA1Q12791 1236 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 GRAPQ13588 217 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 SLC18A3Q16572 532 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 MEA1Q16626 185 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 SYDE1Q6ZW31 735 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 ARID3BQ8IVW6 561 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 BBS7Q8IWZ6 715 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 SCAIQ8N9R8 606 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 GRAPLQ8TC17 118 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 COX4I2Q96KJ9 171 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 BCAS3Q9H6U6 928 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 EML4Q9HC35 981 aaKnown RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 TUFT1Q9NNX1 390 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 FBXO28Q9NVF7 368 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 ATPIF1Q9UII2 106 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 COL5A2P05997 1499 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 KLHL33A6NCF5 533 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 PRPSAP2O60256 369 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 UCHL3P15374 230 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 PSMB9P28065 219 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 TALDO1P37837 337 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 EPS8Q12929 822 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 ACAP1Q15027 740 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 ASPRV1Q53RT3 343 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 TTMPQ5BVD1 217 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 C4orf32Q8N8J7 132 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 SYTL5Q8TDW5 730 aaPredicted RBP9.56□□□□□ -0.88
SMC6-207ENST00000448223 SERPINB12Q96P63 405 aa9.56□□□□□ -0.88
SMC6-207ENST00000448223 RBM15Q96T37 977 aaKnown RBP eCLIP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms