RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ZFPM2Q8WW38 1151 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SEC14L1Q92503 715 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 PEX13Q92968 403 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ATP6V1E2Q96A05 226 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 DACT3Q96B18 629 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 DACH2Q96NX9 599 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SEZ6LQ9BYH1 1024 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TAGLN3Q9UI15 199 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 A3GALT2U3KPV4 340 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 EXOC1LA0A1B0GW35 172 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 DNALI1O14645 258 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 TFECO14948 347 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 RNASEH2AO75792 299 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 ALX3O95076 343 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 LYPLA2O95372 231 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ZBTB11O95625 1053 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 GNAZP19086 355 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 HTR7P34969 479 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 GALK1P51570 392 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 HSD17B4P51659 736 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CTTNQ14247 550 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 KCTD2Q14681 263 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 KLHL35Q6PF15 583 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TDRPQ86YL5 185 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ZNF34Q8IZ26 560 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 PPWD1Q96BP3 646 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 TAMM41Q96BW9 452 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 C19orf60Q96EN9 201 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 FAM111AQ96PZ2 611 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CHID1Q9BWS9 393 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SPG7Q9UQ90 795 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CFL2Q9Y281 166 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 AXIN2Q9Y2T1 843 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SLC12A7Q9Y666 1083 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CITO14578 2027 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ZNF609O15014 1411 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 KLF18A0A0U1RQI7 1052 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 B2RBV5 119 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 PRPF4O43172 522 aaKnown RBP eCLIP3.03□□□□□ -1.928e-7■□□□□ 10.5
CHD9-203ENST00000447540 DNAJC6O75061 913 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 VAPBO95292 243 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 OXSR1O95747 527 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 CDK4P11802 303 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 NCAM1P13591 858 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 GARTP22102 1010 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 HOXD10P28358 340 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 NPTX2P47972 431 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 RFX4Q33E94 735 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 AGMOQ6ZNB7 445 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 KIF18BQ86Y91 864 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 GATAD2AQ86YP4 633 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 KCT2Q8NC54 265 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ING2Q9H160 280 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 MUC13Q9H3R2 512 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ZNF221Q9UK13 617 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 KCNE2Q9Y6J6 123 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TOPBP1Q92547 1522 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TTC26A0AVF1 554 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ARID3CA6NKF2 412 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TLL1O43897 1013 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 IL18RAPO95256 599 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 AP2S1P53680 142 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 PTENP60484 403 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TOMM20Q15388 145 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 MYLK3Q32MK0 819 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 PLEKHG6Q3KR16 790 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 DCDC5Q6ZRR9 648 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TMC7Q7Z402 723 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 RBFAQ8N0V3 343 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TTC13Q8NBP0 860 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SPATA20Q8TB22 786 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TEX47Q8TBZ9 253 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SNX19Q92543 992 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 INPP4AQ96PE3 977 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 EMILIN2Q9BXX0 1053 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 PACSIN1Q9BY11 444 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 LGALS13Q9UHV8 139 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 DAPK2Q9UIK4 370 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CDH7Q9ULB5 785 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 PCDHA12Q9UN75 941 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 AP3M1Q9Y2T2 418 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ORC6Q9Y5N6 252 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ZC3H4Q9UPT8 1303 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 IRS2Q9Y4H2 1338 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 SOBPA7XYQ1 873 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 INO80B-WBP1J3KQ70 363 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 TRIM24O15164 1050 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ATF2P15336 505 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ADD2P35612 726 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 CAP1Q01518 475 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 EZH2Q15910 746 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 LBHQ53QV2 105 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 RSBN1LQ6PCB5 846 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 ARCQ7LC44 396 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 ZDHHC12Q96GR4 267 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 REXO5Q96IC2 774 aaKnown RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 EYA1Q99502 592 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 C9orf16Q9BUW7 83 aa3.03□□□□□ -1.92
CHD9-203ENST00000447540 RNF26Q9BY78 433 aaPredicted RBP3.03□□□□□ -1.92
CHD9-203ENST00000447540 SNX25Q9H3E2 840 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms