RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CLCN4P51793 760 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 CDR2Q01850 454 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 DUSP6Q16828 381 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 TCEAL5Q5H9L2 206 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 LLGL2Q6P1M3 1020 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 LILRA6Q6PI73 481 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 SPPL2BQ8TCT7 592 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 SLC22A17Q8WUG5 538 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 PANX2Q96RD6 677 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 SMOQ99835 787 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 SYT11Q9BT88 431 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 PDCL3Q9H2J4 239 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 NSUN3Q9H649 340 aaKnown RBP19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 IGFLR1Q9H665 355 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 CYP4F11Q9HBI6 524 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 SEPT11Q9NVA2 429 aaKnown RBP19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 MTCH2Q9Y6C9 303 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 TULP2O00295 520 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 BEST1O76090 585 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 FAM200BP0CF97 657 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 HAPLN1P10915 354 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 ATF2P15336 505 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 ELF1P32519 619 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 EIF4A3P38919 411 aaKnown RBP19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 GSDMDP57764 484 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 RBM10P98175 930 aaKnown RBP19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 SMARCB1Q12824 385 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 STILQ15468 1287 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 MEA1Q16626 185 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 MGAT5BQ3V5L5 792 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 CFAP221Q4G0U5 840 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 SDHAF4Q5VUM1 108 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 SCN4BQ8IWT1 228 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 KREMEN2Q8NCW0 462 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 C2orf15Q8WU43 125 aaKnown RBP19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 SECISBP2LQ93073 1101 aaKnown RBP19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 SMARCD1Q96GM5 515 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 FUBP3Q96I24 572 aaKnown RBP eCLIP19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 PCDHB18PQ96TA0 734 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 SEPT5Q99719 369 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 HESX1Q9UBX0 185 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 FBXW11Q9UKB1 542 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 PCDHGC3Q9UN70 934 aa19.05■□□□□ 0.64
TRAPPC4-203ENST00000447216 PRRG1O14668 218 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 TNFAIP3P21580 790 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 BCAT1P54687 386 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 MAP3K7CLP57077 242 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 PDE4CQ08493 712 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 HYAL1Q12794 435 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 DDR2Q16832 855 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 PKDCCQ504Y2 493 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 CLEC20AQ6ZU45 233 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 ZNF677Q86XU0 584 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 MICALL1Q8N3F8 863 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 ANKRD52Q8NB46 1076 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 STKLD1Q8NE28 680 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 ZMIZ2Q8NF64 920 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 KCNK16Q96T55 309 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 DUSP16Q9BY84 665 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 ABCB6Q9NP58 842 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 LMCD1Q9NZU5 365 aa19.04■□□□□ 0.64
TRAPPC4-203ENST00000447216 REV3LO60673 3130 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 F8VP50 259 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 NPR3P17342 541 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 GRIK1P39086 918 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 MAGEA11P43364 429 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 BST2Q10589 180 aaKnown RBP19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 C1orf131Q8NDD1 294 aaKnown RBP19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 VN1R2Q8NFZ6 395 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 GPR152Q8TDT2 470 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 MYLIPQ8WY64 445 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 GAS2L1Q99501 681 aaPredicted RBP19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 MAN1C1Q9NR34 630 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 CYTH4Q9UIA0 394 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 YIPF1Q9Y548 306 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 HCFC2Q9Y5Z7 792 aa19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 BZW2Q9Y6E2 419 aaKnown RBP19.03■□□□□ 0.64
TRAPPC4-203ENST00000447216 C2orf16Q68DN1 1984 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 BRWD1Q9NSI6 2320 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 DDX3XO00571 662 aaKnown RBP eCLIP19.02■□□□□ 0.648e-12■■■■□ 21.2
TRAPPC4-203ENST00000447216 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 RGS7P49802 495 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 CCDC173Q0VFZ6 552 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 NAA35Q5VZE5 725 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 VSTM1Q6UX27 236 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 TCEAL8Q8IYN2 117 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 WDTC1Q8N5D0 677 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 SLC7A14Q8TBB6 771 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 GIPC2Q8TF65 315 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 PPP2R3CQ969Q6 453 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 DMAP1Q9NPF5 467 aaPredicted RBP19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 INSL5Q9Y5Q6 135 aa19.02■□□□□ 0.64
TRAPPC4-203ENST00000447216 LINC01565O15544 149 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 C8AP07357 584 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 SETSIPP0DME0 302 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 ATF6P18850 670 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 FECHP22830 423 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 GPD2P43304 727 aa19.01■□□□□ 0.63
TRAPPC4-203ENST00000447216 NOMO3P69849 1222 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms