RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 PIGHQ14442 188 aaPredicted RBP16.89■□□□□ 0.29
NLE1-202ENST00000442241 FNBP1LQ5T0N5 605 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 CCDC62Q6P9F0 684 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 ZC3H18Q86VM9 953 aaKnown RBP16.89■□□□□ 0.29
NLE1-202ENST00000442241 XYLT1Q86Y38 959 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 RFX6Q8HWS3 928 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 GPATCH2LQ9NWQ4 482 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 PNMA3Q9UL41 463 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 ANK1P16157 1881 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 LOC285556D6RIA3 1793 aa16.89■□□□□ 0.29
NLE1-202ENST00000442241 SNX3O60493 162 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 LGR5O75473 907 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 UBOX5O94941 541 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 GBP2P32456 591 aaPredicted RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 IREB2P48200 963 aaKnown RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 ITIH4Q14624 930 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 FAM71DQ8N9W8 422 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 KCTD6Q8NC69 237 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 KLF6Q99612 283 aaPredicted RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 HCRTO43612 131 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 CDH16O75309 829 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 RPSAP08865 295 aaKnown RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 KRT15P19012 456 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 GCLCP48506 637 aaPredicted RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 CTCFP49711 727 aaPredicted RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 AP3M2P53677 418 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 RNASEH2BQ5TBB1 312 aaKnown RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 CGB2Q6NT52 195 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 CROCCP2Q86T23 111 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 TBC1D1Q86TI0 1168 aaPredicted RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 RSRC1Q96IZ7 334 aaKnown RBP16.88■□□□□ 0.29
NLE1-202ENST00000442241 RNF181Q9P0P0 153 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 BAIAP2L1Q9UHR4 511 aa16.88■□□□□ 0.29
NLE1-202ENST00000442241 GOLGA8RI6L899 631 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 C22orf31O95567 290 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 CYP3A5P20815 502 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 MIPP30301 263 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 WDR4P57081 412 aaKnown RBP16.87■□□□□ 0.29
NLE1-202ENST00000442241 YWHAEP62258 255 aaKnown RBP16.87■□□□□ 0.29
NLE1-202ENST00000442241 ATP11AP98196 1134 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 FAM102AQ5T9C2 384 aaPredicted RBP16.87■□□□□ 0.29
NLE1-202ENST00000442241 TRNP1Q6NT89 227 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 PLPPR4Q7Z2D5 763 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 TRPM8Q7Z2W7 1104 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 STAMBPL1Q96FJ0 436 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 PEBP4Q96S96 227 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 C2orf40Q9H1Z8 148 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 SMARCAD1Q9H4L7 1026 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 GRID1Q9ULK0 1009 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 TRIM33Q9UPN9 1127 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.87■□□□□ 0.29
NLE1-202ENST00000442241 B4GALT4O60513 344 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 KDELR1P24390 212 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 PTPN11Q06124 597 aaPredicted RBP16.87■□□□□ 0.29
NLE1-202ENST00000442241 TFDP1Q14186 410 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 NAA25Q14CX7 972 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 AMHR2Q16671 573 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 KIF2BQ8N4N8 673 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 AFG1LQ8WV93 481 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 CKAP2Q8WWK9 683 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 TBC1D31Q96DN5 1066 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 RMDN2Q96LZ7 410 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 KAT6AQ92794 2004 aa16.87■□□□□ 0.29
NLE1-202ENST00000442241 WDR91A4D1P6 747 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 SIGLEC16A6NMB1 481 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 ARF4P18085 180 aaPredicted RBP16.86■□□□□ 0.29
NLE1-202ENST00000442241 GPX6P59796 221 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 DNAJC3Q13217 504 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 SLC10A6Q3KNW5 377 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 C1orf228Q6PIY5 440 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 ARMCX2Q7L311 632 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 KIRREL3Q8IZU9 778 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 CCDC63Q8NA47 563 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 BBOF1Q8ND07 529 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 NSMCE1Q8WV22 266 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 NLRP7Q8WX94 980 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 MAML1Q92585 1016 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 PRCCQ92733 491 aaPredicted RBP16.86■□□□□ 0.29
NLE1-202ENST00000442241 CDCA5Q96FF9 252 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 CCDC77Q9BR77 488 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 MAGEB5Q9BZ81 275 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 PDZD7Q9H5P4 517 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 ZNF408Q9H9D4 720 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 SLCO1B3Q9NPD5 702 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 BATF3Q9NR55 127 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 NKIRAS1Q9NYS0 192 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 A0A0G2JMZ2 1700 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 LRRC37A2A6NM11 1700 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 PPEF2O14830 753 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 RPL22P35268 128 aaKnown RBP16.86■□□□□ 0.29
NLE1-202ENST00000442241 ADCYAP1R1P41586 468 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 NDST1P52848 882 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 BASP1P80723 227 aaKnown RBP16.86■□□□□ 0.29
NLE1-202ENST00000442241 SCYL2Q6P3W7 929 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 HPDLQ96IR7 371 aa16.86■□□□□ 0.29
NLE1-202ENST00000442241 WDR83Q9BRX9 315 aaKnown RBP16.86■□□□□ 0.29
NLE1-202ENST00000442241 ADARB2Q9NS39 739 aaKnown RBP16.86■□□□□ 0.29
NLE1-202ENST00000442241 FAM49BQ9NUQ9 324 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms